RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 CCL24O00175 119 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 SOSTDC1Q6X4U4 206 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 PRIMA1Q86XR5 153 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE12JA6NER3 117 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE4Q13068 117 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE5Q13069 117 aa11.99□□□□□ -0.49
PRKCSH-205ENST00000587327 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
PRKCSH-205ENST00000587327 WNK1Q9H4A3 2382 aa11.98□□□□□ -0.49
PRKCSH-205ENST00000587327 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
PRKCSH-205ENST00000587327 SHISA2Q6UWI4 295 aa11.98□□□□□ -0.49
PRKCSH-205ENST00000587327 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
PRKCSH-205ENST00000587327 COX7A2LO14548 114 aa11.97□□□□□ -0.49
PRKCSH-205ENST00000587327 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
PRKCSH-205ENST00000587327 Q6Q795 121 aa11.97□□□□□ -0.49
PRKCSH-205ENST00000587327 LINC01006Q8NI28 216 aa11.97□□□□□ -0.49
PRKCSH-205ENST00000587327 MTORP42345 2549 aa11.96□□□□□ -0.49
PRKCSH-205ENST00000587327 FAM240AA0A1B0GVK7 77 aa11.96□□□□□ -0.49
PRKCSH-205ENST00000587327 HERV-K104P63124 156 aa11.96□□□□□ -0.49
PRKCSH-205ENST00000587327 NIPBLQ6KC79 2804 aaeCLIP11.96□□□□□ -0.5
PRKCSH-205ENST00000587327 GIG44P09565 113 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 C16orf95Q9H693 158 aa11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 UBE2L6O14933 153 aa11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-205ENST00000587327 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
PRKCSH-205ENST00000587327 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
PRKCSH-205ENST00000587327 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
PRKCSH-205ENST00000587327 PPDPFQ9H3Y8 114 aa11.94□□□□□ -0.5
PRKCSH-205ENST00000587327 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
PRKCSH-205ENST00000587327 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-205ENST00000587327 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
PRKCSH-205ENST00000587327 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
PRKCSH-205ENST00000587327 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
PRKCSH-205ENST00000587327 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
PRKCSH-205ENST00000587327 CMC4P56277 68 aaPredicted RBP11.92□□□□□ -0.5
PRKCSH-205ENST00000587327 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 GAGE7O76087 117 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 LOC100131303A0A0U1RQF7 123 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 TRBV6-4A0A1B0GX49 114 aa11.91□□□□□ -0.5
PRKCSH-205ENST00000587327 HILS1P60008 231 aa11.9□□□□□ -0.5
PRKCSH-205ENST00000587327 JMJD1CQ15652 2540 aa11.9□□□□□ -0.5
PRKCSH-205ENST00000587327 GAGE6Q13070 117 aa11.89□□□□□ -0.51
PRKCSH-205ENST00000587327 TRACP01848 142 aa11.89□□□□□ -0.51
PRKCSH-205ENST00000587327 SMR3AQ99954 134 aa11.89□□□□□ -0.51
PRKCSH-205ENST00000587327 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
PRKCSH-205ENST00000587327 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
PRKCSH-205ENST00000587327 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-205ENST00000587327 COX7B2Q8TF08 81 aa11.88□□□□□ -0.51
PRKCSH-205ENST00000587327 PF4P02776 101 aa11.87□□□□□ -0.51
PRKCSH-205ENST00000587327 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
PRKCSH-205ENST00000587327 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
PRKCSH-205ENST00000587327 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
PRKCSH-205ENST00000587327 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
PRKCSH-205ENST00000587327 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
PRKCSH-205ENST00000587327 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
PRKCSH-205ENST00000587327 ACYP1P07311 99 aa11.86□□□□□ -0.51
PRKCSH-205ENST00000587327 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
PRKCSH-205ENST00000587327 FAM218AQ96MZ4 157 aa11.85□□□□□ -0.51
PRKCSH-205ENST00000587327 IGLV1-51P01701 117 aa11.85□□□□□ -0.51
PRKCSH-205ENST00000587327 MIR7-3HGQ8N6C7 128 aa11.85□□□□□ -0.51
PRKCSH-205ENST00000587327 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 RPL28P46779 137 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 FHL2Q14192 279 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 TOMM7Q9P0U1 55 aa11.84□□□□□ -0.51
PRKCSH-205ENST00000587327 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 TRBV7-7A0A0K0K1E9 115 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 CRPP02741 224 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 LINC00337Q8N6G1 96 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.52
PRKCSH-205ENST00000587327 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
PRKCSH-205ENST00000587327 B5MCH6 92 aa11.82□□□□□ -0.52
PRKCSH-205ENST00000587327 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
PRKCSH-205ENST00000587327 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
PRKCSH-205ENST00000587327 HIVEP2P31629 2446 aa11.82□□□□□ -0.52
PRKCSH-205ENST00000587327 CHCHD5Q9BSY4 110 aa11.81□□□□□ -0.52
PRKCSH-205ENST00000587327 CCDC179H3BU77 68 aa11.81□□□□□ -0.52
PRKCSH-205ENST00000587327 LINC00158P58513 81 aa11.81□□□□□ -0.52
PRKCSH-205ENST00000587327 A0A087WZ39 114 aa11.8□□□□□ -0.52
PRKCSH-205ENST00000587327 LY6G6DO95868 133 aa11.79□□□□□ -0.52
PRKCSH-205ENST00000587327 KRTAP10-3P60369 221 aa11.79□□□□□ -0.52
PRKCSH-205ENST00000587327 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
PRKCSH-205ENST00000587327 CCL18P55774 89 aa11.78□□□□□ -0.52
PRKCSH-205ENST00000587327 Q9HAA7 133 aa11.78□□□□□ -0.52
PRKCSH-205ENST00000587327 SMCR5Q8TEV8 140 aa11.78□□□□□ -0.52
PRKCSH-205ENST00000587327 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
PRKCSH-205ENST00000587327 SMIM11BQ8TCY0 68 aa11.77□□□□□ -0.53
PRKCSH-205ENST00000587327 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
PRKCSH-205ENST00000587327 MALP21145 153 aa11.77□□□□□ -0.53
PRKCSH-205ENST00000587327 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.53
PRKCSH-205ENST00000587327 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
PRKCSH-205ENST00000587327 INAFM2P0DMQ5 153 aa11.76□□□□□ -0.53
PRKCSH-205ENST00000587327 LINC00643Q86TS7 51 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms