RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GAGE2DQ9UEU5 116 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 V9GYV3 84 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 M0QXV9 152 aa7.05□□□□□ -1.28
BRCA1-225ENST00000586385 NDUFA1O15239 70 aa7.05□□□□□ -1.28
BRCA1-225ENST00000586385 MRPL51Q4U2R6 128 aaKnown RBP7.05□□□□□ -1.28
BRCA1-225ENST00000586385 C9orf129Q5T035 196 aaKnown RBP7.05□□□□□ -1.28
BRCA1-225ENST00000586385 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
BRCA1-225ENST00000586385 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
BRCA1-225ENST00000586385 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
BRCA1-225ENST00000586385 CEBPGP53567 150 aa7.04□□□□□ -1.28
BRCA1-225ENST00000586385 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
BRCA1-225ENST00000586385 PPP1R17O96001 155 aa7.03□□□□□ -1.28
BRCA1-225ENST00000586385 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
BRCA1-225ENST00000586385 RPL32P62910 135 aaKnown RBP7.03□□□□□ -1.28
BRCA1-225ENST00000586385 SMAGPQ0VAQ4 97 aa7.03□□□□□ -1.28
BRCA1-225ENST00000586385 TMEM241Q24JQ0 296 aa7.03□□□□□ -1.28
BRCA1-225ENST00000586385 FAM104BQ5XKR9 115 aa7.03□□□□□ -1.28
BRCA1-225ENST00000586385 SMIM7Q9BQ49 75 aa7.03□□□□□ -1.28
BRCA1-225ENST00000586385 TRBV24-1A0A075B6N3 115 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 PPP1R2P9O14990 202 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 UBE2D1P51668 147 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
BRCA1-225ENST00000586385 RIGQ13278 110 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 C20orf78Q9BR46 151 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 SPANXA1Q9NS26 97 aa7.02□□□□□ -1.29
BRCA1-225ENST00000586385 CARHSP1Q9Y2V2 147 aaKnown RBP7.02□□□□□ -1.29
BRCA1-225ENST00000586385 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 TSPAN13O95857 204 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 UBE2BP63146 152 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 TMEM18Q96B42 140 aa7.01□□□□□ -1.29
BRCA1-225ENST00000586385 A0A087X002 238 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 A0A0U1RQV1 116 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 IFITM10A6NMD0 228 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 ZNF861PO60384 105 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 TNFRSF6BO95407 300 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
BRCA1-225ENST00000586385 ZNF727A8MUV8 499 aa6.99□□□□□ -1.29
BRCA1-225ENST00000586385 NDUFC2-KCTD14E9PQ53 114 aa6.99□□□□□ -1.29
BRCA1-225ENST00000586385 TCAPO15273 167 aa6.99□□□□□ -1.29
BRCA1-225ENST00000586385 NPYP01303 97 aa6.99□□□□□ -1.29
BRCA1-225ENST00000586385 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
BRCA1-225ENST00000586385 HBBP68871 147 aa6.99□□□□□ -1.29
BRCA1-225ENST00000586385 TRBV30A0A0K0K1B3 111 aa6.98□□□□□ -1.29
BRCA1-225ENST00000586385 LINC00862A6NCI5 91 aa6.98□□□□□ -1.29
BRCA1-225ENST00000586385 CKS2P33552 79 aa6.98□□□□□ -1.29
BRCA1-225ENST00000586385 FAM74A3Q4VXF1 159 aa6.98□□□□□ -1.29
BRCA1-225ENST00000586385 IGLV4-3A0A075B6K6 122 aa6.97□□□□□ -1.29
BRCA1-225ENST00000586385 TGIF2-C20orf24A0A0A6YYL0 155 aa6.97□□□□□ -1.29
BRCA1-225ENST00000586385 SMIM27A0A1W2PRY6 76 aa6.97□□□□□ -1.29
BRCA1-225ENST00000586385 D6R8Y8 96 aa6.97□□□□□ -1.29
BRCA1-225ENST00000586385 RPL23P62829 140 aaKnown RBP6.97□□□□□ -1.29
BRCA1-225ENST00000586385 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
BRCA1-225ENST00000586385 ZC2HC1BQ5TFG8 222 aa6.96□□□□□ -1.3
BRCA1-225ENST00000586385 CTDSP1Q9GZU7 261 aa6.96□□□□□ -1.3
BRCA1-225ENST00000586385 EIF5A2Q9GZV4 153 aaKnown RBP6.96□□□□□ -1.3
BRCA1-225ENST00000586385 C22orf24Q9Y442 160 aa6.96□□□□□ -1.3
BRCA1-225ENST00000586385 A0A1B0GXF2 115 aa6.95□□□□□ -1.3
BRCA1-225ENST00000586385 C9JQL5 133 aa6.95□□□□□ -1.3
BRCA1-225ENST00000586385 LINC00469Q8N7U9 141 aa6.95□□□□□ -1.3
BRCA1-225ENST00000586385 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
BRCA1-225ENST00000586385 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
BRCA1-225ENST00000586385 CLLU1Q5K131 121 aa6.94□□□□□ -1.3
BRCA1-225ENST00000586385 LINC00173Q6ZV60 143 aa6.94□□□□□ -1.3
BRCA1-225ENST00000586385 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
BRCA1-225ENST00000586385 ANAPC11Q9NYG5 84 aa6.94□□□□□ -1.3
BRCA1-225ENST00000586385 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
BRCA1-225ENST00000586385 NUPR1O60356 82 aa6.93□□□□□ -1.3
BRCA1-225ENST00000586385 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
BRCA1-225ENST00000586385 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
BRCA1-225ENST00000586385 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-225ENST00000586385 A0A1B0GW15 77 aa6.92□□□□□ -1.3
BRCA1-225ENST00000586385 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-225ENST00000586385 ADIRFQ15847 76 aa6.92□□□□□ -1.3
BRCA1-225ENST00000586385 TMEM141Q96I45 108 aa6.92□□□□□ -1.3
BRCA1-225ENST00000586385 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
BRCA1-225ENST00000586385 BCE1O60756 84 aa6.91□□□□□ -1.3
BRCA1-225ENST00000586385 CRYGAP11844 174 aa6.91□□□□□ -1.3
BRCA1-225ENST00000586385 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
BRCA1-225ENST00000586385 TYMSOSQ8TAI1 123 aa6.91□□□□□ -1.3
BRCA1-225ENST00000586385 AMELXQ99217 191 aa6.91□□□□□ -1.3
BRCA1-225ENST00000586385 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
BRCA1-225ENST00000586385 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.3
BRCA1-225ENST00000586385 TP73-AS1Q9UF72 201 aa6.9□□□□□ -1.3
BRCA1-225ENST00000586385 PPBPP02775 128 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
BRCA1-225ENST00000586385 PEA15Q15121 130 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-225ENST00000586385 TEX43Q6ZNM6 134 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 MRPL55Q7Z7F7 128 aaKnown RBP6.89□□□□□ -1.31
BRCA1-225ENST00000586385 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 TOMM7Q9P0U1 55 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 NAT8Q9UHE5 227 aa6.89□□□□□ -1.31
BRCA1-225ENST00000586385 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 PRSS47A8MTI9 375 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 F8W036 122 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 RAB5AP20339 215 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms