RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 FAM208BQ5VWN6 2430 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 BBC3Q96PG8 261 aaPredicted RBP4.14□□□□□ -1.75
RTTN-209ENST00000583043 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 DOPEY1Q5JWR5 2465 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 MT-ATP8P03928 68 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 DNAH12Q6ZR08 3092 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 ATRXP46100 2492 aa4.14□□□□□ -1.75
RTTN-209ENST00000583043 Q6ZSN1 163 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
RTTN-209ENST00000583043 ADAMTSL4-AS1Q5T5F5 129 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 TRANK1O15050 2925 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 HIVEP2P31629 2446 aa4.13□□□□□ -1.75
RTTN-209ENST00000583043 TRAV23DV6A0A075B6W5 121 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 A0A096LPF7 62 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 GVQW2A0A096LPI5 108 aaPredicted RBP4.12□□□□□ -1.75
RTTN-209ENST00000583043 NDUFC1O43677 76 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 LITAFQ99732 161 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 NCOR2Q9Y618 2525 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 LINC00694P0DN24 101 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 HAMPP81172 84 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 WFDC9Q8NEX5 89 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 XGP55808 180 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 CLPSL2Q6UWE3 100 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 CCKP06307 115 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 ZNF575Q86XF7 245 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 COX6A2Q02221 97 aa4.12□□□□□ -1.75
RTTN-209ENST00000583043 DEFB131BA0A096LNP1 70 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 INAFM1C9JVW0 142 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 C3orf22Q8N5N4 141 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 ESM1Q9NQ30 184 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 CEP350Q5VT06 3117 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 IGLV10-54A0A075B6I4 117 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 J3KT08 172 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 NREPQ16612 68 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 NTM-AS1Q6ZSK4 140 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 HIVEP3Q5T1R4 2406 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 KPRPQ5T749 579 aaPredicted RBP4.11□□□□□ -1.75
RTTN-209ENST00000583043 Q8N814 137 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 BRCA2P51587 3418 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 SPG11Q96JI7 2443 aa4.11□□□□□ -1.75
RTTN-209ENST00000583043 NCR3O14931 201 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 IGHV4-30-4P0DP06 118 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 RPL18AQ02543 176 aaKnown RBP4.1□□□□□ -1.75
RTTN-209ENST00000583043 C6orf99Q4VX62 202 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 A0A0J9YWU9 116 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
RTTN-209ENST00000583043 C14orf132Q9NPU4 83 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 IGLV4-60A0A075B6I1 120 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 TMEM258P61165 79 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 CEP295Q9C0D2 2601 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 A8MZ25 164 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 CSNK1G2-AS1Q8NCQ2 148 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 CDIP1Q9H305 208 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 X6R8D5 127 aa4.1□□□□□ -1.75
RTTN-209ENST00000583043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.09□□□□□ -1.75
RTTN-209ENST00000583043 Q9HAA7 133 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 LINC00474Q9P2X8 69 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 LOC107984640A0A0U1RRK4 108 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 B5MCH6 92 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 COX7CP15954 63 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 ANKRD11Q6UB99 2663 aaPredicted RBP4.09□□□□□ -1.75
RTTN-209ENST00000583043 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 ARHGAP32A7KAX9 2087 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 CYSRT1A8MQ03 144 aa4.09□□□□□ -1.75
RTTN-209ENST00000583043 SMCPP49901 116 aaPredicted RBP4.09□□□□□ -1.75
RTTN-209ENST00000583043 SDIM1Q6ZPB5 146 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 CSPG4Q6UVK1 2322 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 LINC01556Q5JQF7 62 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 PRYO14603 147 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 PRRC2AP48634 2157 aaKnown RBP4.08□□□□□ -1.76
RTTN-209ENST00000583043 LINC00575Q6W349 94 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 WFDC10AQ9H1F0 79 aa4.08□□□□□ -1.76
RTTN-209ENST00000583043 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 LYPD5Q6UWN5 251 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 C19orf73Q9NVV2 129 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 USP34Q70CQ2 3546 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 UBE2BP63146 152 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 LINC00337Q8N6G1 96 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 C4orf48Q5BLP8 95 aa4.07□□□□□ -1.76
RTTN-209ENST00000583043 NDUFB1O75438 58 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 LOC110117498A0A087WWA1 95 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 USP17L23D6RBM5 183 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 B9D2Q9BPU9 175 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 PIEZO2Q9H5I5 2752 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 WIPF1O43516 503 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 CXCL6P80162 114 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 BPY2O14599 106 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 Q6ZQY7 126 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 KRTAP1-3Q8IUG1 177 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms