RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 FAT1Q14517 4588 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 K7EMI3 77 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 SDIM1Q6ZPB5 146 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 PRSS3P2Q8NHM4 247 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 LINC00526Q96FQ7 95 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
SMARCE1-218ENST00000582955 TGIF2-C20orf24A0A0A6YYL0 155 aa8.1□□□□□ -1.11
SMARCE1-218ENST00000582955 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
SMARCE1-218ENST00000582955 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
SMARCE1-218ENST00000582955 ALKBH7Q9BT30 221 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-218ENST00000582955 G0S2P27469 103 aa8.09□□□□□ -1.11
SMARCE1-218ENST00000582955 Q6ZN92 141 aa8.09□□□□□ -1.11
SMARCE1-218ENST00000582955 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
SMARCE1-218ENST00000582955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-218ENST00000582955 PANO1I0J062 215 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 APOMO95445 188 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 CARD19Q96LW7 228 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 TRAPPC1Q9Y5R8 145 aa8.08□□□□□ -1.12
SMARCE1-218ENST00000582955 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
SMARCE1-218ENST00000582955 COX6A2Q02221 97 aa8.07□□□□□ -1.12
SMARCE1-218ENST00000582955 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
SMARCE1-218ENST00000582955 VCX2Q9H322 139 aa8.07□□□□□ -1.12
SMARCE1-218ENST00000582955 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 TOMM6Q96B49 74 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
SMARCE1-218ENST00000582955 NPSP0C0P6 89 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 UBE2D1P51668 147 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 LINC00242Q5T6M2 205 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 SLC7A5P1Q8MH63 180 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 CAMK2N2Q96S95 79 aa8.05□□□□□ -1.12
SMARCE1-218ENST00000582955 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 CIRBPQ14011 172 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 OR10D4PQ8NGN7 298 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 AMELXQ99217 191 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
SMARCE1-218ENST00000582955 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 LINC01546A6NGU7 62 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 MAJINQ3KP22 176 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 Q6ZRU5 148 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 ERASQ7Z444 233 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
SMARCE1-218ENST00000582955 A0A087WYN8 130 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 A0A087WZ39 114 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 A0A096LNI7 61 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 CBLN2Q8IUK8 224 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.13
SMARCE1-218ENST00000582955 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
SMARCE1-218ENST00000582955 YPEL4Q96NS1 127 aa8.01□□□□□ -1.13
SMARCE1-218ENST00000582955 LOC107984640A0A0U1RRK4 108 aa8□□□□□ -1.13
SMARCE1-218ENST00000582955 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
SMARCE1-218ENST00000582955 STPG4Q8N801 248 aa8□□□□□ -1.13
SMARCE1-218ENST00000582955 GEMIN7Q9H840 131 aaKnown RBP8□□□□□ -1.13
SMARCE1-218ENST00000582955 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
SMARCE1-218ENST00000582955 A0A0J9YXV3 536 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 NDUFA1O15239 70 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 LINC00614P0C842 121 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 HERVK_113P63121 156 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 SEC11AP67812 179 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-218ENST00000582955 F8WDY8 70 aa7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 RAB5BP61020 215 aa7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 URB1-AS1Q96HZ7 61 aa7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 PACRGQ96M98 296 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 MRPL35Q9NZE8 188 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-218ENST00000582955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 PRSS2P07478 247 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 PTTG1IPP53801 180 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 PMCHL1Q16048 86 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 CDKN2A-AS1Q9UH64 79 aa7.97□□□□□ -1.13
SMARCE1-218ENST00000582955 A0A096LNJ9 63 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 HBDP02042 147 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 268.8 ms