RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 RHEBQ15382 184 aa6.52□□□□□ -1.37
PPP4R1-220ENST00000581835 DPH3Q96FX2 82 aa6.52□□□□□ -1.37
PPP4R1-220ENST00000581835 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
PPP4R1-220ENST00000581835 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
PPP4R1-220ENST00000581835 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 ORMDL2Q53FV1 153 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 C2orf66Q6UXQ4 117 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 GNB1LQ9BYB4 327 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 CYSLTR1Q9Y271 337 aa6.51□□□□□ -1.37
PPP4R1-220ENST00000581835 A0A096LNI7 61 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 IGKV2-24A0A0C4DH68 120 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 APOMO95445 188 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 RPL37AP61513 92 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 COX19Q49B96 90 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
PPP4R1-220ENST00000581835 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 MAJINQ3KP22 176 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 TEX43Q6ZNM6 134 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 Q6ZRU5 148 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 OR10D4PQ8NGN7 298 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 AMELXQ99217 191 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 ALKBH7Q9BT30 221 aaPredicted RBP6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 PKIGQ9Y2B9 76 aa6.49□□□□□ -1.37
PPP4R1-220ENST00000581835 APOC3P02656 99 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 MT-ND6P03923 174 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 NPSP0C0P6 89 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 G0S2P27469 103 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 UBE2D1P51668 147 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 SPAG11BQ08648 103 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 ZC2HC1BQ5TFG8 222 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 ORAOV1Q8WV07 137 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 VCX2Q9H322 139 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 LINC00474Q9P2X8 69 aa6.48□□□□□ -1.37
PPP4R1-220ENST00000581835 A0A087WZ39 114 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 TGIF2-C20orf24A0A0A6YYL0 155 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 LINC01546A6NGU7 62 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 Q6ZN92 141 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 STPG4Q8N801 248 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
PPP4R1-220ENST00000581835 LOC107984640A0A0U1RRK4 108 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 HNRNPA3P51991 378 aaKnown RBP6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 FABP9Q0Z7S8 132 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 RNF151Q2KHN1 245 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 SVBPQ8N300 66 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 TIMM17AQ99595 171 aa6.46□□□□□ -1.38
PPP4R1-220ENST00000581835 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 F8WDY8 70 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 SNAPINO95295 136 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 NDUFA5Q16718 116 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 PAPPA-AS1Q5QFB9 102 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 LINC01561Q8N1V8 128 aa6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
PPP4R1-220ENST00000581835 NDUFA1O15239 70 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 ERASQ7Z444 233 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
PPP4R1-220ENST00000581835 LINC01549A6NIU2 74 aa6.43□□□□□ -1.38
PPP4R1-220ENST00000581835 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 J3QL48 77 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 HERVK_113P63121 156 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 SEC11AP67812 179 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 RPL18AQ02543 176 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 FA2HQ7L5A8 372 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 SMCO4Q9NRQ5 59 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
PPP4R1-220ENST00000581835 OXTP01178 125 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 TLX1NBP0CAT3 122 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 C9orf116Q5BN46 136 aaPredicted RBP6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 C2orf82Q6UX34 121 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 C18orf32Q8TCD1 76 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 URB1-AS1Q96HZ7 61 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
PPP4R1-220ENST00000581835 A0A096LNJ9 63 aa6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 TRBV30A0A0K0K1B3 111 aa6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 Q6ZRP5 223 aa6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 YPEL4Q96NS1 127 aa6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 GEMIN7Q9H840 131 aaKnown RBP6.4□□□□□ -1.38
PPP4R1-220ENST00000581835 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
PPP4R1-220ENST00000581835 PRSS2P07478 247 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms