RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 C1orf158Q8N1D5 194 aa3.23□□□□□ -1.89
RTTN-206ENST00000581161 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
RTTN-206ENST00000581161 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
RTTN-206ENST00000581161 CELA1Q9UNI1 258 aa3.23□□□□□ -1.89
RTTN-206ENST00000581161 HCFC1P51610 2035 aa3.23□□□□□ -1.89
RTTN-206ENST00000581161 GAS8-AS1O95177 125 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 MRPS36P82909 103 aaKnown RBP3.22□□□□□ -1.89
RTTN-206ENST00000581161 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 SVILO95425 2214 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 K7EIM0 57 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 ZNF80P51504 273 aaPredicted RBP3.22□□□□□ -1.89
RTTN-206ENST00000581161 ZFAND3Q9H8U3 227 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 PCNX2A6NKB5 2137 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 KLK9Q2XQG4 91 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 COL12A1Q99715 3063 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 IGHV7-81A0A0B4J1V7 117 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 BLCAPP62952 87 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 LINC00643Q86TS7 51 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 ICE1Q9Y2F5 2266 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 CUBNO60494 3623 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 TNCP24821 2201 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 CEP295Q9C0D2 2601 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 PDZD2O15018 2839 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 RP1L1Q8IWN7 2480 aaPredicted RBP3.22□□□□□ -1.89
RTTN-206ENST00000581161 TRBV7-3A0A075B6L6 115 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 TRBV6-1A0A0K0K1D8 114 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 DNAJC9-AS1A6NH13 148 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 MRGPRG-AS1Q2M3A8 158 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 CACNA1HO95180 2353 aa3.22□□□□□ -1.89
RTTN-206ENST00000581161 ARFGEF3Q5TH69 2177 aa3.21□□□□□ -1.89
RTTN-206ENST00000581161 REG3AQ06141 175 aa3.21□□□□□ -1.89
RTTN-206ENST00000581161 WFDC2Q14508 124 aa3.21□□□□□ -1.89
RTTN-206ENST00000581161 U3KQK5 164 aa3.21□□□□□ -1.89
RTTN-206ENST00000581161 LY6HO94772 140 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 TTC28Q96AY4 2481 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 TENM4Q6N022 2769 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 PRAC2D3DTV9 90 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 H7C423 109 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 Q6JHZ5 121 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 NRACQ8N912 160 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 INTS1Q8N201 2190 aaKnown RBP3.21□□□□□ -1.9
RTTN-206ENST00000581161 A0A1B0GU69 56 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 CCKP06307 115 aa3.21□□□□□ -1.9
RTTN-206ENST00000581161 RBAKDNA6NC62 111 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 E7EQL1 145 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 EP300Q09472 2414 aaPredicted RBP3.2□□□□□ -1.9
RTTN-206ENST00000581161 DSCAMO60469 2012 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 PLCE1Q9P212 2302 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 IGLV2-18A0A075B6J9 118 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 UQCRQO14949 82 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 Q6ZS92 163 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 C6orf223Q8N319 242 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
RTTN-206ENST00000581161 YLPM1P49750 1951 aaKnown RBP3.2□□□□□ -1.9
RTTN-206ENST00000581161 M0R378 163 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 ENHOQ6UWT2 76 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 MAPKAPK5-AS1Q8N8E1 139 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 LINC00467Q9BRT7 94 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 ROS1P08922 2347 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 CEP250Q9BV73 2442 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 DEFB4AO15263 64 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 IGLV1-47P01700 117 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 MIR7-3HGQ8N6C7 128 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 FAM30AQ9NZY2 134 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 LENEPQ9Y5L5 61 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 NAV3Q8IVL0 2385 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 MAP1BP46821 2468 aaKnown RBP3.2□□□□□ -1.9
RTTN-206ENST00000581161 DNAH3Q8TD57 4116 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 IGLC6P0CF74 106 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 HIGD1BQ9P298 99 aa3.2□□□□□ -1.9
RTTN-206ENST00000581161 HEATR1Q9H583 2144 aaKnown RBP3.2□□□□□ -1.9
RTTN-206ENST00000581161 IGLV4-69A0A075B6H9 119 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 M0QXV9 152 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 PIK3CD-AS1Q5SR53 167 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 COX17Q14061 63 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 ZFP36P26651 326 aaKnown RBP3.19□□□□□ -1.9
RTTN-206ENST00000581161 IGSF10Q6WRI0 2623 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 AGPAT4-IT1Q9H0P7 198 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 TNFRSF13BO14836 293 aaPredicted RBP3.19□□□□□ -1.9
RTTN-206ENST00000581161 C3orf84H3BNL1 204 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 MRPS12O15235 138 aaKnown RBP3.19□□□□□ -1.9
RTTN-206ENST00000581161 ZNF73O43830 326 aaPredicted RBP3.19□□□□□ -1.9
RTTN-206ENST00000581161 CHCHD10Q8WYQ3 142 aaPredicted RBP3.19□□□□□ -1.9
RTTN-206ENST00000581161 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
RTTN-206ENST00000581161 CNOT1A5YKK6 2376 aaKnown RBP3.18□□□□□ -1.9
RTTN-206ENST00000581161 MIAQ16674 131 aa3.18□□□□□ -1.9
RTTN-206ENST00000581161 KMT2BQ9UMN6 2715 aaPredicted RBP3.18□□□□□ -1.9
RTTN-206ENST00000581161 TRAV26-1A0A087WT03 109 aa3.18□□□□□ -1.9
RTTN-206ENST00000581161 RNASE3P12724 160 aaKnown RBP3.18□□□□□ -1.9
RTTN-206ENST00000581161 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
RTTN-206ENST00000581161 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
RTTN-206ENST00000581161 C8orf17Q9NRJ1 99 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms