RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
SMARCE1-216ENST00000580419 Q6ZUT4 128 aa9.02□□□□□ -0.97
SMARCE1-216ENST00000580419 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SMARCE1-216ENST00000580419 MRPL35Q9NZE8 188 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-216ENST00000580419 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
SMARCE1-216ENST00000580419 TRAV13-1A0A0B4J241 112 aa9.01□□□□□ -0.97
SMARCE1-216ENST00000580419 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
SMARCE1-216ENST00000580419 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
SMARCE1-216ENST00000580419 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
SMARCE1-216ENST00000580419 A0A0J9YXV3 536 aa9□□□□□ -0.97
SMARCE1-216ENST00000580419 D6R8Y8 96 aa9□□□□□ -0.97
SMARCE1-216ENST00000580419 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
SMARCE1-216ENST00000580419 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
SMARCE1-216ENST00000580419 PNRC1Q12796 327 aaPredicted RBP9□□□□□ -0.97
SMARCE1-216ENST00000580419 ORMDL3Q8N138 153 aa9□□□□□ -0.97
SMARCE1-216ENST00000580419 A0A1B0GVG6 124 aa8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 K7EMI3 77 aa8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 NPSP0C0P6 89 aa8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
SMARCE1-216ENST00000580419 KRTAP10-8P60410 259 aa8.98□□□□□ -0.97
SMARCE1-216ENST00000580419 ODF1Q14990 250 aa8.98□□□□□ -0.97
SMARCE1-216ENST00000580419 LINC01561Q8N1V8 128 aa8.98□□□□□ -0.97
SMARCE1-216ENST00000580419 NPYP01303 97 aa8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 C5orf38Q86SI9 138 aa8.97□□□□□ -0.97
SMARCE1-216ENST00000580419 A0A087WZ39 114 aa8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 RAB5AP20339 215 aa8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 RNASE13Q5GAN3 156 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 LRP2P98164 4655 aa8.96□□□□□ -0.98
SMARCE1-216ENST00000580419 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
SMARCE1-216ENST00000580419 NDUFA1O15239 70 aa8.95□□□□□ -0.98
SMARCE1-216ENST00000580419 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-216ENST00000580419 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
SMARCE1-216ENST00000580419 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
SMARCE1-216ENST00000580419 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
SMARCE1-216ENST00000580419 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
SMARCE1-216ENST00000580419 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
SMARCE1-216ENST00000580419 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
SMARCE1-216ENST00000580419 TMEM141Q96I45 108 aa8.93□□□□□ -0.98
SMARCE1-216ENST00000580419 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
SMARCE1-216ENST00000580419 G0S2P27469 103 aa8.92□□□□□ -0.98
SMARCE1-216ENST00000580419 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
SMARCE1-216ENST00000580419 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
SMARCE1-216ENST00000580419 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
SMARCE1-216ENST00000580419 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
SMARCE1-216ENST00000580419 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-216ENST00000580419 Q8N8P6 123 aa8.91□□□□□ -0.98
SMARCE1-216ENST00000580419 MAP1LC3AQ9H492 121 aa8.91□□□□□ -0.98
SMARCE1-216ENST00000580419 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
SMARCE1-216ENST00000580419 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.98
SMARCE1-216ENST00000580419 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
SMARCE1-216ENST00000580419 AMELXQ99217 191 aa8.9□□□□□ -0.98
SMARCE1-216ENST00000580419 OPRPNQ99935 248 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-216ENST00000580419 CYSLTR1Q9Y271 337 aa8.9□□□□□ -0.98
SMARCE1-216ENST00000580419 MT-ND6P03923 174 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 UBE2D1P51668 147 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 RAB14P61106 215 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
SMARCE1-216ENST00000580419 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
SMARCE1-216ENST00000580419 SEC11AP67812 179 aa8.88□□□□□ -0.99
SMARCE1-216ENST00000580419 Q6ZN92 141 aa8.88□□□□□ -0.99
SMARCE1-216ENST00000580419 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-216ENST00000580419 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 LINC01549A6NIU2 74 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 DIRC1Q969H9 104 aa8.87□□□□□ -0.99
SMARCE1-216ENST00000580419 VCX2Q9H322 139 aa8.86□□□□□ -0.99
SMARCE1-216ENST00000580419 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
SMARCE1-216ENST00000580419 C1orf137Q5JT78 98 aa8.85□□□□□ -0.99
SMARCE1-216ENST00000580419 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
SMARCE1-216ENST00000580419 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-216ENST00000580419 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
SMARCE1-216ENST00000580419 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 HERVK_113P63121 156 aa8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 CLLU1Q5K131 121 aa8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 Q8IZM0 81 aa8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 CTDSP1Q9GZU7 261 aa8.84□□□□□ -0.99
SMARCE1-216ENST00000580419 UQCC3Q6UW78 93 aa8.83□□□□□ -1
SMARCE1-216ENST00000580419 LOC389332A0A1B0GUA5 103 aa8.82□□□□□ -1
SMARCE1-216ENST00000580419 H0Y9J4 135 aa8.82□□□□□ -1
SMARCE1-216ENST00000580419 LINC01546A6NGU7 62 aa8.81□□□□□ -1
SMARCE1-216ENST00000580419 KRTAP7-1Q8IUC3 87 aa8.81□□□□□ -1
SMARCE1-216ENST00000580419 TOMM6Q96B49 74 aa8.81□□□□□ -1
SMARCE1-216ENST00000580419 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
SMARCE1-216ENST00000580419 FAM168BA1KXE4 195 aa8.8□□□□□ -1
SMARCE1-216ENST00000580419 PRSS2P07478 247 aa8.8□□□□□ -1
SMARCE1-216ENST00000580419 CXCL5P42830 114 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms