RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 TEX43Q6ZNM6 134 aa11.24□□□□□ -0.61
ITGB4-205ENST00000579211 C2orf88Q9BSF0 95 aa11.24□□□□□ -0.61
ITGB4-205ENST00000579211 MRPL18Q9H0U6 180 aaKnown RBP11.24□□□□□ -0.61
ITGB4-205ENST00000579211 COX6A2Q02221 97 aa11.23□□□□□ -0.61
ITGB4-205ENST00000579211 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
ITGB4-205ENST00000579211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
ITGB4-205ENST00000579211 IGLV4-3A0A075B6K6 122 aa11.22□□□□□ -0.61
ITGB4-205ENST00000579211 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
ITGB4-205ENST00000579211 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
ITGB4-205ENST00000579211 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
ITGB4-205ENST00000579211 VCX2Q9H322 139 aa11.22□□□□□ -0.61
ITGB4-205ENST00000579211 FAM104AQ969W3 186 aa11.21□□□□□ -0.61
ITGB4-205ENST00000579211 ALKBH7Q9BT30 221 aaPredicted RBP11.21□□□□□ -0.61
ITGB4-205ENST00000579211 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 IGKV2-24A0A0C4DH68 120 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 SMCO4Q9NRQ5 59 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
ITGB4-205ENST00000579211 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
ITGB4-205ENST00000579211 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
ITGB4-205ENST00000579211 PANO1I0J062 215 aa11.18□□□□□ -0.62
ITGB4-205ENST00000579211 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
ITGB4-205ENST00000579211 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
ITGB4-205ENST00000579211 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
ITGB4-205ENST00000579211 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
ITGB4-205ENST00000579211 NPSP0C0P6 89 aa11.17□□□□□ -0.62
ITGB4-205ENST00000579211 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
ITGB4-205ENST00000579211 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
ITGB4-205ENST00000579211 FAT1Q14517 4588 aa11.17□□□□□ -0.62
ITGB4-205ENST00000579211 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
ITGB4-205ENST00000579211 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
ITGB4-205ENST00000579211 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
ITGB4-205ENST00000579211 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
ITGB4-205ENST00000579211 A0A087WYN8 130 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 IGIPA6NJ69 53 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 ZC2HC1BQ5TFG8 222 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
ITGB4-205ENST00000579211 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
ITGB4-205ENST00000579211 UBE2D1P51668 147 aa11.14□□□□□ -0.63
ITGB4-205ENST00000579211 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
ITGB4-205ENST00000579211 CIRBPQ14011 172 aaKnown RBP11.14□□□□□ -0.63
ITGB4-205ENST00000579211 Q6ZRU5 148 aa11.14□□□□□ -0.63
ITGB4-205ENST00000579211 AMELXQ99217 191 aa11.14□□□□□ -0.63
ITGB4-205ENST00000579211 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
ITGB4-205ENST00000579211 A0A096LNI7 61 aa11.13□□□□□ -0.63
ITGB4-205ENST00000579211 SEC11AP67812 179 aa11.13□□□□□ -0.63
ITGB4-205ENST00000579211 ERASQ7Z444 233 aa11.13□□□□□ -0.63
ITGB4-205ENST00000579211 STPG4Q8N801 248 aa11.13□□□□□ -0.63
ITGB4-205ENST00000579211 A0A087WZ39 114 aa11.12□□□□□ -0.63
ITGB4-205ENST00000579211 NDUFA1O15239 70 aa11.12□□□□□ -0.63
ITGB4-205ENST00000579211 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
ITGB4-205ENST00000579211 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
ITGB4-205ENST00000579211 F8WDY8 70 aa11.11□□□□□ -0.63
ITGB4-205ENST00000579211 LINC00173Q6ZV60 143 aa11.11□□□□□ -0.63
ITGB4-205ENST00000579211 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
ITGB4-205ENST00000579211 HERVK_113P63121 156 aa11.1□□□□□ -0.63
ITGB4-205ENST00000579211 RPL18AQ02543 176 aaKnown RBP11.1□□□□□ -0.63
ITGB4-205ENST00000579211 SLC7A5P1Q8MH63 180 aa11.1□□□□□ -0.63
ITGB4-205ENST00000579211 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
ITGB4-205ENST00000579211 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
ITGB4-205ENST00000579211 PRSS2P07478 247 aa11.09□□□□□ -0.63
ITGB4-205ENST00000579211 RAB5BP61020 215 aa11.09□□□□□ -0.63
ITGB4-205ENST00000579211 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
ITGB4-205ENST00000579211 PLAC8Q9NZF1 115 aa11.09□□□□□ -0.63
ITGB4-205ENST00000579211 A0A0J9YXV3 536 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 LINC00614P0C842 121 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 C18orf32Q8TCD1 76 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
ITGB4-205ENST00000579211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
ITGB4-205ENST00000579211 MRPL35Q9NZE8 188 aaKnown RBP11.07□□□□□ -0.64
ITGB4-205ENST00000579211 NDUFA6P56556 154 aa11.06□□□□□ -0.64
ITGB4-205ENST00000579211 UNQ6190/PRO20217Q6UXQ8 127 aa11.06□□□□□ -0.64
ITGB4-205ENST00000579211 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
ITGB4-205ENST00000579211 CKS1BP61024 79 aa11.05□□□□□ -0.64
ITGB4-205ENST00000579211 PMVKQ15126 192 aa11.05□□□□□ -0.64
ITGB4-205ENST00000579211 C6orf226Q5I0X4 101 aa11.05□□□□□ -0.64
ITGB4-205ENST00000579211 CBLN2Q8IUK8 224 aa11.04□□□□□ -0.64
ITGB4-205ENST00000579211 LINC00469Q8N7U9 141 aa11.04□□□□□ -0.64
ITGB4-205ENST00000579211 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
ITGB4-205ENST00000579211 HBDP02042 147 aa11.03□□□□□ -0.64
ITGB4-205ENST00000579211 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
ITGB4-205ENST00000579211 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
ITGB4-205ENST00000579211 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 J3QL48 77 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 PMCHL1Q16048 86 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 C6orf48Q9UBA6 75 aa11.02□□□□□ -0.65
ITGB4-205ENST00000579211 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
ITGB4-205ENST00000579211 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
ITGB4-205ENST00000579211 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
ITGB4-205ENST00000579211 GAGE2EQ4V326 116 aa11□□□□□ -0.65
ITGB4-205ENST00000579211 Q8IZM0 81 aa11□□□□□ -0.65
ITGB4-205ENST00000579211 URB1-AS1Q96HZ7 61 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms