RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 LINC00242Q5T6M2 205 aa15.39■□□□□ 0.05
ERBB2-209ENST00000578709 ZC2HC1BQ5TFG8 222 aa15.39■□□□□ 0.05
ERBB2-209ENST00000578709 SLPIP03973 132 aa15.38■□□□□ 0.05
ERBB2-209ENST00000578709 LINC01620Q4KN68 170 aa15.38■□□□□ 0.05
ERBB2-209ENST00000578709 HERC2O95714 4834 aa15.38■□□□□ 0.05
ERBB2-209ENST00000578709 MALP21145 153 aa15.37■□□□□ 0.05
ERBB2-209ENST00000578709 C5orf38Q86SI9 138 aa15.37■□□□□ 0.05
ERBB2-209ENST00000578709 C9orf163Q8N9P6 203 aa15.37■□□□□ 0.05
ERBB2-209ENST00000578709 CHCHD1Q96BP2 118 aaKnown RBP15.37■□□□□ 0.05
ERBB2-209ENST00000578709 HBDP02042 147 aa15.36■□□□□ 0.05
ERBB2-209ENST00000578709 FAM19A3Q7Z5A8 133 aa15.36■□□□□ 0.05
ERBB2-209ENST00000578709 HSPG2P98160 4391 aa15.35■□□□□ 0.05
ERBB2-209ENST00000578709 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-209ENST00000578709 COX6A2Q02221 97 aa15.34■□□□□ 0.05
ERBB2-209ENST00000578709 PMCHL1Q16048 86 aa15.34■□□□□ 0.05
ERBB2-209ENST00000578709 Q6ZSA8 131 aa15.34■□□□□ 0.05
ERBB2-209ENST00000578709 DNAH8Q96JB1 4490 aa15.33■□□□□ 0.04
ERBB2-209ENST00000578709 APOMO95445 188 aa15.33■□□□□ 0.04
ERBB2-209ENST00000578709 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
ERBB2-209ENST00000578709 FAM30AQ9NZY2 134 aa15.33■□□□□ 0.04
ERBB2-209ENST00000578709 A0A087WZ39 114 aa15.32■□□□□ 0.04
ERBB2-209ENST00000578709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-209ENST00000578709 XGP55808 180 aa15.32■□□□□ 0.04
ERBB2-209ENST00000578709 S100A1P23297 94 aa15.31■□□□□ 0.04
ERBB2-209ENST00000578709 SEC11AP67812 179 aa15.31■□□□□ 0.04
ERBB2-209ENST00000578709 BAGE3Q86Y29 109 aa15.31■□□□□ 0.04
ERBB2-209ENST00000578709 CST9LQ9H4G1 147 aa15.31■□□□□ 0.04
ERBB2-209ENST00000578709 IGHV3-64A0A075B6Q5 118 aa15.3■□□□□ 0.04
ERBB2-209ENST00000578709 ZNF561-AS1K7EIQ3 104 aa15.3■□□□□ 0.04
ERBB2-209ENST00000578709 OR10D4PQ8NGN7 298 aa15.3■□□□□ 0.04
ERBB2-209ENST00000578709 LINC00526Q96FQ7 95 aa15.3■□□□□ 0.04
ERBB2-209ENST00000578709 PMVKQ15126 192 aa15.29■□□□□ 0.04
ERBB2-209ENST00000578709 SDIM1Q6ZPB5 146 aa15.29■□□□□ 0.04
ERBB2-209ENST00000578709 LINC01561Q8N1V8 128 aa15.29■□□□□ 0.04
ERBB2-209ENST00000578709 ATP6V1G1O75348 118 aa15.28■□□□□ 0.04
ERBB2-209ENST00000578709 HERVK_113P63121 156 aa15.28■□□□□ 0.04
ERBB2-209ENST00000578709 IGLV4-69A0A075B6H9 119 aa15.27■□□□□ 0.04
ERBB2-209ENST00000578709 A0A0J9YXV3 536 aa15.27■□□□□ 0.04
ERBB2-209ENST00000578709 ATP5LO75964 103 aa15.27■□□□□ 0.04
ERBB2-209ENST00000578709 LINC00310P59036 64 aa15.26■□□□□ 0.03
ERBB2-209ENST00000578709 SPAG11BQ08648 103 aa15.26■□□□□ 0.03
ERBB2-209ENST00000578709 ORAOV1Q8WV07 137 aa15.26■□□□□ 0.03
ERBB2-209ENST00000578709 C2orf48Q96LS8 159 aa15.26■□□□□ 0.03
ERBB2-209ENST00000578709 TINCRA0A1B0GVN0 87 aa15.25■□□□□ 0.03
ERBB2-209ENST00000578709 HSBP1O75506 76 aa15.25■□□□□ 0.03
ERBB2-209ENST00000578709 SERF1AO75920 110 aa15.25■□□□□ 0.03
ERBB2-209ENST00000578709 SYCNQ0VAF6 134 aa15.25■□□□□ 0.03
ERBB2-209ENST00000578709 GEMIN7Q9H840 131 aaKnown RBP15.25■□□□□ 0.03
ERBB2-209ENST00000578709 CARD19Q96LW7 228 aa15.24■□□□□ 0.03
ERBB2-209ENST00000578709 CDKN2A-AS1Q9UH64 79 aa15.23■□□□□ 0.03
ERBB2-209ENST00000578709 IGLV5-45A0A087WSX0 123 aa15.22■□□□□ 0.03
ERBB2-209ENST00000578709 F8WDY8 70 aa15.22■□□□□ 0.03
ERBB2-209ENST00000578709 HAMPP81172 84 aa15.21■□□□□ 0.03
ERBB2-209ENST00000578709 FAM19A2Q8N3H0 131 aa15.21■□□□□ 0.03
ERBB2-209ENST00000578709 CAMK2N2Q96S95 79 aa15.21■□□□□ 0.03
ERBB2-209ENST00000578709 CHAC1Q9BUX1 264 aa15.21■□□□□ 0.03
ERBB2-209ENST00000578709 HIST1H2BKO60814 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BJP06899 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BOP23527 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BBP33778 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 NDUFA6P56556 154 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BDP58876 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BCP62807 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 KIAA0087Q14695 138 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST2H2BEQ16778 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-209ENST00000578709 Q6ZRU5 148 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BHQ93079 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BNQ99877 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 HIST1H2BMQ99879 126 aa15.2■□□□□ 0.02
ERBB2-209ENST00000578709 IGLC3P0DOY3 106 aa15.19■□□□□ 0.02
ERBB2-209ENST00000578709 LINC00469Q8N7U9 141 aa15.19■□□□□ 0.02
ERBB2-209ENST00000578709 IFI27L1Q96BM0 104 aa15.19■□□□□ 0.02
ERBB2-209ENST00000578709 KRTAP17-1Q9BYP8 105 aa15.19■□□□□ 0.02
ERBB2-209ENST00000578709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-209ENST00000578709 NUPR1O60356 82 aa15.18■□□□□ 0.02
ERBB2-209ENST00000578709 CIRBPQ14011 172 aaKnown RBP15.18■□□□□ 0.02
ERBB2-209ENST00000578709 SCXQ7RTU7 201 aa15.18■□□□□ 0.02
ERBB2-209ENST00000578709 Q8N1X5 172 aa15.17■□□□□ 0.02
ERBB2-209ENST00000578709 PKIGQ9Y2B9 76 aa15.17■□□□□ 0.02
ERBB2-209ENST00000578709 PANO1I0J062 215 aa15.16■□□□□ 0.02
ERBB2-209ENST00000578709 NDUFA1O15239 70 aa15.16■□□□□ 0.02
ERBB2-209ENST00000578709 RNF151Q2KHN1 245 aa15.16■□□□□ 0.02
ERBB2-209ENST00000578709 CIRBP-AS1Q8TBR5 109 aa15.15■□□□□ 0.02
ERBB2-209ENST00000578709 PACRGQ96M98 296 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-209ENST00000578709 MRPL35Q9NZE8 188 aaKnown RBP15.15■□□□□ 0.02
ERBB2-209ENST00000578709 TRAV12-1A0A0B4J245 112 aa15.14■□□□□ 0.01
ERBB2-209ENST00000578709 SMIM1B2RUZ4 78 aa15.14■□□□□ 0.01
ERBB2-209ENST00000578709 CHTF8P0CG12 524 aa15.13■□□□□ 0.01
ERBB2-209ENST00000578709 C10orf25Q5T742 122 aa15.13■□□□□ 0.01
ERBB2-209ENST00000578709 Q8IZM0 81 aa15.13■□□□□ 0.01
ERBB2-209ENST00000578709 SPACA4Q8TDM5 124 aa15.13■□□□□ 0.01
ERBB2-209ENST00000578709 LEPROTL1O95214 131 aa15.12■□□□□ 0.01
ERBB2-209ENST00000578709 UNQ6190/PRO20217Q6UXQ8 127 aa15.12■□□□□ 0.01
ERBB2-209ENST00000578709 LOC107984640A0A0U1RRK4 108 aa15.11■□□□□ 0.01
ERBB2-209ENST00000578709 H3BRM9 83 aa15.11■□□□□ 0.01
ERBB2-209ENST00000578709 PRSS2P07478 247 aa15.11■□□□□ 0.01
ERBB2-209ENST00000578709 CHTOPQ9Y3Y2 248 aaKnown RBP15.11■□□□□ 0.01
ERBB2-209ENST00000578709 A0A096LNI7 61 aa15.1■□□□□ 0.01
ERBB2-209ENST00000578709 SMR3BP02814 79 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms