RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 NAA38Q9BRA0 125 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 GRIFINA4D1Z8 144 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 C9JQL5 133 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 H7C1H1 209 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 ZNF56Q15929 161 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 SDIM1Q6ZPB5 146 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 CHCHD5Q9BSY4 110 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
SMARCE1-214ENST00000578112 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-214ENST00000578112 K7EP34 96 aa7.21□□□□□ -1.26
SMARCE1-214ENST00000578112 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 IGHV1-24A0A0C4DH33 117 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 PMVKQ15126 192 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 RPL7L1Q6DKI1 246 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 MRPL54Q6P161 138 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 MBD3L1Q8WWY6 194 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 HLA-DQA1P01909 254 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
SMARCE1-214ENST00000578112 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 CCDC179H3BU77 68 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 MLST8Q9BVC4 326 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
SMARCE1-214ENST00000578112 CACNG7P62955 275 aa7.18□□□□□ -1.26
SMARCE1-214ENST00000578112 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
SMARCE1-214ENST00000578112 KIF25-AS1Q9Y6Z4 181 aa7.18□□□□□ -1.26
SMARCE1-214ENST00000578112 SPANXN1Q5VSR9 72 aa7.18□□□□□ -1.26
SMARCE1-214ENST00000578112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-214ENST00000578112 A6NDN8 102 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 REG3AQ06141 175 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 C1orf195Q5TG92 126 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 NTM-AS1Q6ZSK4 140 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 PLAC8Q9NZF1 115 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 TMSB15BA0A087X1C1 80 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 MEIG1Q5JSS6 88 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 C7orf33Q8WU49 177 aa7.17□□□□□ -1.26
SMARCE1-214ENST00000578112 ADIRFQ15847 76 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 LINC00269Q8N2A0 174 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 IGLV10-54A0A075B6I4 117 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 F5H697 171 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 BAGE2Q86Y30 109 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
SMARCE1-214ENST00000578112 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
SMARCE1-214ENST00000578112 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.27
SMARCE1-214ENST00000578112 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-214ENST00000578112 F2Z2F3 143 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 H7C423 109 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 M0QY20 66 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 Q6ZUT4 128 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 C20orf203Q8NBC4 194 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 CYTL1Q9NRR1 136 aa7.14□□□□□ -1.27
SMARCE1-214ENST00000578112 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 IGLC6P0CF74 106 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 ST20Q9HBF5 79 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 ZNF727A8MUV8 499 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 NCR2O95944 276 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 RNASE7Q9H1E1 156 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
SMARCE1-214ENST00000578112 C9orf118A6NHY6 69 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 ATP5LO75964 103 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 MANBALQ9NQG1 85 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 A0A087WYN8 130 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
SMARCE1-214ENST00000578112 UBE2L6O14933 153 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 PANO1I0J062 215 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 SEC11AP67812 179 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 SUMO4Q6EEV6 95 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 Q6Q795 121 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
SMARCE1-214ENST00000578112 F8W1H4 67 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 CD164Q04900 197 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 SPINK6Q6UWN8 80 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 GVQW2A0A096LPI5 108 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 H3BRM9 83 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 VPREB1P12018 145 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 IFITM1P13164 125 aa7.1□□□□□ -1.27
SMARCE1-214ENST00000578112 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 C19orf71A6NCJ1 209 aa7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 CLPSL2Q6UWE3 100 aa7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 EIF5A2Q9GZV4 153 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-214ENST00000578112 MGPP08493 103 aa7.09□□□□□ -1.28
SMARCE1-214ENST00000578112 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.28
SMARCE1-214ENST00000578112 PNRC1Q12796 327 aaPredicted RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms