RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CEBPGP53567 150 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 C10orf25Q5T742 122 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 SLC51BQ86UW2 128 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 NRACQ8N912 160 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 RIGQ13278 110 aa6.95□□□□□ -1.3
CTDNEP1-212ENST00000576613 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
CTDNEP1-212ENST00000576613 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
CTDNEP1-212ENST00000576613 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
CTDNEP1-212ENST00000576613 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 HBBP68871 147 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 SMIM7Q9BQ49 75 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 C20orf78Q9BR46 151 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
CTDNEP1-212ENST00000576613 ZNF861PO60384 105 aa6.92□□□□□ -1.3
CTDNEP1-212ENST00000576613 TSPAN13O95857 204 aa6.92□□□□□ -1.3
CTDNEP1-212ENST00000576613 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-212ENST00000576613 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-212ENST00000576613 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-212ENST00000576613 LINC00862A6NCI5 91 aa6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 NUPR1O60356 82 aa6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 NAT8BQ9UHF3 227 aa6.91□□□□□ -1.3
CTDNEP1-212ENST00000576613 TRBV24-1A0A075B6N3 115 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 CKS2P33552 79 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
CTDNEP1-212ENST00000576613 ZNF727A8MUV8 499 aa6.89□□□□□ -1.31
CTDNEP1-212ENST00000576613 SMIM2Q9BVW6 85 aa6.89□□□□□ -1.31
CTDNEP1-212ENST00000576613 EIF5A2Q9GZV4 153 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-212ENST00000576613 V9GYV3 84 aa6.89□□□□□ -1.31
CTDNEP1-212ENST00000576613 A0A1B0GW15 77 aa6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
CTDNEP1-212ENST00000576613 CRYGAP11844 174 aa6.87□□□□□ -1.31
CTDNEP1-212ENST00000576613 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-212ENST00000576613 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
CTDNEP1-212ENST00000576613 A0A087X002 238 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 PRSS2P07478 247 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 CKS1BP61024 79 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 CTDSP1Q9GZU7 261 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
CTDNEP1-212ENST00000576613 D6R8Y8 96 aa6.85□□□□□ -1.31
CTDNEP1-212ENST00000576613 F8W036 122 aa6.85□□□□□ -1.31
CTDNEP1-212ENST00000576613 S100A8P05109 93 aa6.85□□□□□ -1.31
CTDNEP1-212ENST00000576613 RAB5AP20339 215 aa6.85□□□□□ -1.31
CTDNEP1-212ENST00000576613 PYGO1Q9Y3Y4 419 aa6.85□□□□□ -1.31
CTDNEP1-212ENST00000576613 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 BCE1O60756 84 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 PPBPP02775 128 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 TMEM141Q96I45 108 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
CTDNEP1-212ENST00000576613 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 NPYP01303 97 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 LINC00469Q8N7U9 141 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 XAGE1AQ9HD64 81 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
CTDNEP1-212ENST00000576613 ADIRFQ15847 76 aa6.82□□□□□ -1.32
CTDNEP1-212ENST00000576613 Q6ZN92 141 aa6.82□□□□□ -1.32
CTDNEP1-212ENST00000576613 RPL23P62829 140 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 MRPL54Q6P161 138 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 Q8IZM0 81 aa6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 ORMDL3Q8N138 153 aa6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 ALKBH7Q9BT30 221 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-212ENST00000576613 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
CTDNEP1-212ENST00000576613 F8VRH5 84 aa6.79□□□□□ -1.32
CTDNEP1-212ENST00000576613 LINC00304Q8N9R0 145 aa6.79□□□□□ -1.32
CTDNEP1-212ENST00000576613 VCX2Q9H322 139 aa6.79□□□□□ -1.32
CTDNEP1-212ENST00000576613 CYSLTR1Q9Y271 337 aa6.79□□□□□ -1.32
CTDNEP1-212ENST00000576613 A0A1B0GXF2 115 aa6.78□□□□□ -1.32
CTDNEP1-212ENST00000576613 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
CTDNEP1-212ENST00000576613 TMEM136Q6ZRR5 245 aa6.78□□□□□ -1.32
CTDNEP1-212ENST00000576613 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
CTDNEP1-212ENST00000576613 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms