RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
HERPUD1-218ENST00000569569 SNAPINO95295 136 aa8.86□□□□□ -0.99
HERPUD1-218ENST00000569569 MT-ND6P03923 174 aa8.86□□□□□ -0.99
HERPUD1-218ENST00000569569 G0S2P27469 103 aa8.86□□□□□ -0.99
HERPUD1-218ENST00000569569 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 IFITM10A6NMD0 228 aa8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 MRPL18Q9H0U6 180 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-218ENST00000569569 APOMO95445 188 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 NPSP0C0P6 89 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 INAFM2P0DMQ5 153 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 PRSS3P2Q8NHM4 247 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 LINC00526Q96FQ7 95 aa8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-218ENST00000569569 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -1
HERPUD1-218ENST00000569569 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
HERPUD1-218ENST00000569569 PANO1I0J062 215 aa8.83□□□□□ -1
HERPUD1-218ENST00000569569 COX6A2Q02221 97 aa8.83□□□□□ -1
HERPUD1-218ENST00000569569 TEX43Q6ZNM6 134 aa8.83□□□□□ -1
HERPUD1-218ENST00000569569 DPH3Q96FX2 82 aa8.83□□□□□ -1
HERPUD1-218ENST00000569569 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 SYCNQ0VAF6 134 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 Q6ZN92 141 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 CARD19Q96LW7 228 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
HERPUD1-218ENST00000569569 IGIPA6NJ69 53 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 TOMM6Q96B49 74 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 AMELXQ99217 191 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 VCX2Q9H322 139 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
HERPUD1-218ENST00000569569 LINC01546A6NGU7 62 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 CHTF8P0CG12 524 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 PAPPA-AS1Q5QFB9 102 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 LINC00242Q5T6M2 205 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 C2orf48Q96LS8 159 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 TIMM17AQ99595 171 aa8.8□□□□□ -1
HERPUD1-218ENST00000569569 A0A087WYN8 130 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 LINC01549A6NIU2 74 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 UBE2D1P51668 147 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 SPAG11BQ08648 103 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 LINC00173Q6ZV60 143 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
HERPUD1-218ENST00000569569 FLG2Q5D862 2391 aaPredicted RBP8.79□□□□□ -1
HERPUD1-218ENST00000569569 A0A087WZ39 114 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 XP32Q5T750 250 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 Q6ZRU5 148 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 FA2HQ7L5A8 372 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 ERASQ7Z444 233 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 SMCO4Q9NRQ5 59 aa8.78□□□□□ -1
HERPUD1-218ENST00000569569 F8WDY8 70 aa8.77□□□□□ -1.01
HERPUD1-218ENST00000569569 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
HERPUD1-218ENST00000569569 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
HERPUD1-218ENST00000569569 SCGB3A1Q96QR1 104 aa8.77□□□□□ -1.01
HERPUD1-218ENST00000569569 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
HERPUD1-218ENST00000569569 A0A096LNI7 61 aa8.76□□□□□ -1.01
HERPUD1-218ENST00000569569 SEC11AP67812 179 aa8.76□□□□□ -1.01
HERPUD1-218ENST00000569569 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
HERPUD1-218ENST00000569569 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
HERPUD1-218ENST00000569569 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
HERPUD1-218ENST00000569569 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
HERPUD1-218ENST00000569569 STPG4Q8N801 248 aa8.75□□□□□ -1.01
HERPUD1-218ENST00000569569 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
HERPUD1-218ENST00000569569 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
HERPUD1-218ENST00000569569 TMEM238LA0A1B0GVL6 79 aa8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 NDUFA1O15239 70 aa8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-218ENST00000569569 LINC00614P0C842 121 aa8.73□□□□□ -1.01
HERPUD1-218ENST00000569569 HERVK_113P63121 156 aa8.73□□□□□ -1.01
HERPUD1-218ENST00000569569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 RAB5BP61020 215 aa8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 URB1-AS1Q96HZ7 61 aa8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 GEMIN7Q9H840 131 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-218ENST00000569569 A0A0J9YXV3 536 aa8.71□□□□□ -1.02
HERPUD1-218ENST00000569569 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
HERPUD1-218ENST00000569569 C7orf33Q8WU49 177 aa8.71□□□□□ -1.02
HERPUD1-218ENST00000569569 PMVKQ15126 192 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 CBLN2Q8IUK8 224 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
HERPUD1-218ENST00000569569 A0A096LNJ9 63 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms