RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 DAZ1Q9NQZ3 744 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 DAZ3Q9NR90 486 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 NAV2Q8IVL1 2488 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 MED13LQ71F56 2210 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 GAGE2AQ6NT46 116 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 LINC00308Q8TCZ7 52 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 BAHCC1Q9P281 2608 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 IGLV5-39A0A0G2JS06 123 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 OR13C6PQ8NH95 151 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 C19orf73Q9NVV2 129 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 UBE2D4Q9Y2X8 147 aa3.94□□□□□ -1.78
LINC01541-202ENST00000568095 H3BUA1 57 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 INAFM2P0DMQ5 153 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 CD28P10747 220 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
LINC01541-202ENST00000568095 BRD3OSQ6XYD6 125 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 TRAV41A0A0B4J266 112 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 OXTP01178 125 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 TRBV12-3P01733 135 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 Q8N2B8 174 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 MAPK1IP1LQ8NDC0 245 aa3.93□□□□□ -1.78
LINC01541-202ENST00000568095 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 Q5XG85 94 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 Q6JHZ5 121 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 SOSTDC1Q6X4U4 206 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 MOB4Q9Y3A3 225 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 K7EMT4 169 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 PIK3CD-AS1Q5SR53 167 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 Q6YL49 198 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 USMG5Q96IX5 58 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 TRAV12-3A0A0B4J271 114 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 hADV29S1A0JD25 119 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 DEFB112Q30KQ8 113 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.92□□□□□ -1.78
LINC01541-202ENST00000568095 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
LINC01541-202ENST00000568095 IGHV1OR15-1A0A075B7D0 117 aa3.91□□□□□ -1.78
LINC01541-202ENST00000568095 RPL28P46779 137 aaKnown RBP3.91□□□□□ -1.78
LINC01541-202ENST00000568095 NPC2P61916 151 aa3.91□□□□□ -1.78
LINC01541-202ENST00000568095 RHPN1-AS1Q9BWJ2 59 aa3.91□□□□□ -1.78
LINC01541-202ENST00000568095 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
LINC01541-202ENST00000568095 IGLV1-40P01703 118 aa3.91□□□□□ -1.78
LINC01541-202ENST00000568095 RPL35AP18077 110 aaKnown RBP3.91□□□□□ -1.78
LINC01541-202ENST00000568095 ZNF625Q96I27 306 aaPredicted RBP3.91□□□□□ -1.78
LINC01541-202ENST00000568095 CIRBPQ14011 172 aaKnown RBP3.9□□□□□ -1.78
LINC01541-202ENST00000568095 KIR2DL5BQ8NHK3 375 aa3.9□□□□□ -1.78
LINC01541-202ENST00000568095 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.78
LINC01541-202ENST00000568095 CREBBPQ92793 2442 aa3.9□□□□□ -1.78
LINC01541-202ENST00000568095 FASNP49327 2511 aaKnown RBP3.9□□□□□ -1.78
LINC01541-202ENST00000568095 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 H3BUX3 64 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 IGHV4-59P01825 116 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 LINC01561Q8N1V8 128 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 HECTD1Q9ULT8 2610 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 PRIMA1Q86XR5 153 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 ZNF702PQ9H963 129 aa3.9□□□□□ -1.79
LINC01541-202ENST00000568095 NSD1Q96L73 2696 aaPredicted RBP3.89□□□□□ -1.79
LINC01541-202ENST00000568095 NF1P21359 2839 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 A8MTW9 85 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 COX6A2Q02221 97 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 TMEM86BQ8N661 226 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 OVOL2Q9BRP0 275 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
LINC01541-202ENST00000568095 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 PSMB8P28062 276 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 BLCAPP62952 87 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
LINC01541-202ENST00000568095 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
LINC01541-202ENST00000568095 CSPG4Q6UVK1 2322 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 LYPD5Q6UWN5 251 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 Q9H8V8 135 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 ESM1Q9NQ30 184 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 HIVEP1P15822 2718 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 IGHV3OR16-12A0A075B7B8 117 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 K7EQG2 157 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 PROK1P58294 105 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 MRAPQ8TCY5 172 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 LINC00846Q9NV44 126 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 NACAE9PAV3 2078 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 MYO9AB2RTY4 2548 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 TRAV12-2A0A075B6T6 113 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 CCL24O00175 119 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 RBMY1A1P0DJD3 496 aaKnown RBP3.88□□□□□ -1.79
LINC01541-202ENST00000568095 RBMY1CP0DJD4 496 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 RBMY1FQ15415 496 aaKnown RBP3.88□□□□□ -1.79
LINC01541-202ENST00000568095 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 Q6ZSN1 163 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 Q9UF83 564 aa3.88□□□□□ -1.79
LINC01541-202ENST00000568095 TRRAPQ9Y4A5 3859 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 TRAV13-2A0A0B4J235 113 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms