RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 COA6Q5JTJ3 125 aaKnown RBP17.15■□□□□ 0.34
NME3-208ENST00000565379 A0A087WTM6 91 aa17.14■□□□□ 0.33
NME3-208ENST00000565379 LRCOL1A6NCL2 159 aa17.14■□□□□ 0.33
NME3-208ENST00000565379 XCL1P47992 114 aa17.14■□□□□ 0.33
NME3-208ENST00000565379 SEC11AP67812 179 aa17.14■□□□□ 0.33
NME3-208ENST00000565379 LINC00173Q6ZV60 143 aa17.14■□□□□ 0.33
NME3-208ENST00000565379 UBE2D1P51668 147 aa17.13■□□□□ 0.33
NME3-208ENST00000565379 PMVKQ15126 192 aa17.13■□□□□ 0.33
NME3-208ENST00000565379 FAM19A2Q8N3H0 131 aa17.13■□□□□ 0.33
NME3-208ENST00000565379 BAALCQ8WXS3 180 aa17.13■□□□□ 0.33
NME3-208ENST00000565379 FOXI1Q12951 378 aa17.12■□□□□ 0.33
NME3-208ENST00000565379 C14orf177Q52M58 125 aa17.12■□□□□ 0.33
NME3-208ENST00000565379 CFAP161Q6P656 301 aa17.12■□□□□ 0.33
NME3-208ENST00000565379 FAM19A3Q7Z5A8 133 aa17.12■□□□□ 0.33
NME3-208ENST00000565379 NUPR1O60356 82 aa17.11■□□□□ 0.33
NME3-208ENST00000565379 LEPROTL1O95214 131 aa17.1■□□□□ 0.33
NME3-208ENST00000565379 NDUFA6P56556 154 aa17.1■□□□□ 0.33
NME3-208ENST00000565379 IFI27L1Q96BM0 104 aa17.1■□□□□ 0.33
NME3-208ENST00000565379 CST9LQ9H4G1 147 aa17.1■□□□□ 0.33
NME3-208ENST00000565379 HSPB8Q9UJY1 196 aa17.1■□□□□ 0.33
NME3-208ENST00000565379 LINC00242Q5T6M2 205 aa17.08■□□□□ 0.32
NME3-208ENST00000565379 ZC2HC1BQ5TFG8 222 aa17.08■□□□□ 0.32
NME3-208ENST00000565379 Q8N1X5 172 aa17.08■□□□□ 0.32
NME3-208ENST00000565379 PACRGQ96M98 296 aaPredicted RBP17.08■□□□□ 0.32
NME3-208ENST00000565379 COX7A2LO14548 114 aa17.07■□□□□ 0.32
NME3-208ENST00000565379 USP17L23D6RBM5 183 aa17.06■□□□□ 0.32
NME3-208ENST00000565379 PRSS1P07477 247 aa17.06■□□□□ 0.32
NME3-208ENST00000565379 HERVK_113P63121 156 aa17.06■□□□□ 0.32
NME3-208ENST00000565379 Q8N814 137 aa17.06■□□□□ 0.32
NME3-208ENST00000565379 IGHV3OR16-9A0A0B4J2B5 98 aa17.05■□□□□ 0.32
NME3-208ENST00000565379 MALP21145 153 aa17.04■□□□□ 0.32
NME3-208ENST00000565379 GEMIN7Q9H840 131 aaKnown RBP17.04■□□□□ 0.32
NME3-208ENST00000565379 TRAV12-1A0A0B4J245 112 aa17.03■□□□□ 0.32
NME3-208ENST00000565379 IGHV1-58A0A0C4DH39 117 aa17.03■□□□□ 0.32
NME3-208ENST00000565379 TINCRA0A1B0GVN0 87 aa17.03■□□□□ 0.32
NME3-208ENST00000565379 APOMO95445 188 aa17.03■□□□□ 0.32
NME3-208ENST00000565379 LINC01561Q8N1V8 128 aa17.03■□□□□ 0.32
NME3-208ENST00000565379 NTN5Q8WTR8 489 aaPredicted RBP17.03■□□□□ 0.32
NME3-208ENST00000565379 LECT2O14960 151 aa17.02■□□□□ 0.32
NME3-208ENST00000565379 WFDC2Q14508 124 aa17.02■□□□□ 0.32
NME3-208ENST00000565379 PGPEP1Q9NXJ5 209 aa17.02■□□□□ 0.32
NME3-208ENST00000565379 FAT1Q14517 4588 aa17.01■□□□□ 0.31
NME3-208ENST00000565379 A0A087WZ39 114 aa17.01■□□□□ 0.31
NME3-208ENST00000565379 S100A6P06703 90 aa17.01■□□□□ 0.31
NME3-208ENST00000565379 A0A0J9YXV3 536 aa17■□□□□ 0.31
NME3-208ENST00000565379 FABP4P15090 132 aa17■□□□□ 0.31
NME3-208ENST00000565379 CDPF1Q6NVV7 123 aa17■□□□□ 0.31
NME3-208ENST00000565379 C5orf38Q86SI9 138 aa17■□□□□ 0.31
NME3-208ENST00000565379 COX6A2Q02221 97 aa16.99■□□□□ 0.31
NME3-208ENST00000565379 IGLC3P0DOY3 106 aa16.98■□□□□ 0.31
NME3-208ENST00000565379 C15orf56Q8N910 161 aa16.98■□□□□ 0.31
NME3-208ENST00000565379 MAP1LC3CQ9BXW4 147 aa16.98■□□□□ 0.31
NME3-208ENST00000565379 GVQW2A0A096LPI5 108 aaPredicted RBP16.97■□□□□ 0.31
NME3-208ENST00000565379 CHTOPQ9Y3Y2 248 aaKnown RBP16.97■□□□□ 0.31
NME3-208ENST00000565379 IGLV5-45A0A087WSX0 123 aa16.96■□□□□ 0.31
NME3-208ENST00000565379 hDV102S1A0JD36 115 aa16.95■□□□□ 0.3
NME3-208ENST00000565379 OR10D4PQ8NGN7 298 aa16.95■□□□□ 0.3
NME3-208ENST00000565379 IGHV3-64A0A075B6Q5 118 aa16.94■□□□□ 0.3
NME3-208ENST00000565379 F8VRH5 84 aa16.94■□□□□ 0.3
NME3-208ENST00000565379 KRTAP10-1P60331 282 aa16.94■□□□□ 0.3
NME3-208ENST00000565379 LINC00469Q8N7U9 141 aa16.94■□□□□ 0.3
NME3-208ENST00000565379 H3BRM9 83 aa16.93■□□□□ 0.3
NME3-208ENST00000565379 CHAC1Q9BUX1 264 aa16.93■□□□□ 0.3
NME3-208ENST00000565379 CDKN2A-AS1Q9UH64 79 aa16.93■□□□□ 0.3
NME3-208ENST00000565379 IGLV4-69A0A075B6H9 119 aa16.92■□□□□ 0.3
NME3-208ENST00000565379 ZNF561-AS1K7EIQ3 104 aa16.92■□□□□ 0.3
NME3-208ENST00000565379 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.91■□□□□ 0.3
NME3-208ENST00000565379 IGLV5-52A0A0A0MRZ9 124 aa16.91■□□□□ 0.3
NME3-208ENST00000565379 S100A2P29034 98 aa16.9■□□□□ 0.3
NME3-208ENST00000565379 CNBPP62633 177 aaKnown RBP16.9■□□□□ 0.3
NME3-208ENST00000565379 HIGD2BQ4VC39 106 aa16.9■□□□□ 0.3
NME3-208ENST00000565379 ORAOV1Q8WV07 137 aa16.9■□□□□ 0.3
NME3-208ENST00000565379 DNAH8Q96JB1 4490 aa16.9■□□□□ 0.3
NME3-208ENST00000565379 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.89■□□□□ 0.29
NME3-208ENST00000565379 F8WDY8 70 aa16.89■□□□□ 0.29
NME3-208ENST00000565379 H0Y8G0 127 aa16.89■□□□□ 0.29
NME3-208ENST00000565379 ODF1Q14990 250 aa16.89■□□□□ 0.29
NME3-208ENST00000565379 MRPL35Q9NZE8 188 aaKnown RBP16.89■□□□□ 0.29
NME3-208ENST00000565379 XGP55808 180 aa16.88■□□□□ 0.29
NME3-208ENST00000565379 HIST3H2BBQ8N257 126 aa16.88■□□□□ 0.29
NME3-208ENST00000565379 SYS1-DBNDD2H3BUS1 97 aa16.87■□□□□ 0.29
NME3-208ENST00000565379 PLNP26678 52 aa16.87■□□□□ 0.29
NME3-208ENST00000565379 SPAG11BQ08648 103 aa16.87■□□□□ 0.29
NME3-208ENST00000565379 C2orf48Q96LS8 159 aa16.87■□□□□ 0.29
NME3-208ENST00000565379 C11orf86A6NJI1 115 aa16.86■□□□□ 0.29
NME3-208ENST00000565379 ZNF22P17026 224 aaPredicted RBP16.86■□□□□ 0.29
NME3-208ENST00000565379 PET117Q6UWS5 81 aa16.86■□□□□ 0.29
NME3-208ENST00000565379 EPM2AB3EWF7 344 aa16.84■□□□□ 0.29
NME3-208ENST00000565379 PRSS2P07478 247 aa16.84■□□□□ 0.29
NME3-208ENST00000565379 SNRPEP62304 92 aaKnown RBP16.84■□□□□ 0.29
NME3-208ENST00000565379 HAMPP81172 84 aa16.84■□□□□ 0.29
NME3-208ENST00000565379 TMEM170BQ5T4T1 132 aa16.84■□□□□ 0.29
NME3-208ENST00000565379 VPS13BQ7Z7G8 4022 aa16.84■□□□□ 0.29
NME3-208ENST00000565379 C5orf52A6NGY3 159 aa16.83■□□□□ 0.28
NME3-208ENST00000565379 SMIM1B2RUZ4 78 aa16.83■□□□□ 0.28
NME3-208ENST00000565379 Q8IZM0 81 aa16.83■□□□□ 0.28
NME3-208ENST00000565379 DPM2O94777 84 aa16.82■□□□□ 0.28
NME3-208ENST00000565379 GCSHP23434 173 aa16.82■□□□□ 0.28
NME3-208ENST00000565379 C3orf79P0CE67 100 aa16.81■□□□□ 0.28
NME3-208ENST00000565379 SYCNQ0VAF6 134 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms