RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
SMG1-211ENST00000565324 IGFL2Q6UWQ7 119 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
SMG1-211ENST00000565324 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 DOPEY1Q5JWR5 2465 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 PIP4P1Q86T03 277 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 LTBP2Q14767 1821 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 A0A096LNI7 61 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 LY6G6EA0A0G2JKS1 128 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
SMG1-211ENST00000565324 Q8N814 137 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 TMEM254Q8TBM7 123 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 U3KQA8 63 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 LRCOL1A6NCL2 159 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
SMG1-211ENST00000565324 A0A1B0GW54 56 aa3.78□□□□□ -1.81
SMG1-211ENST00000565324 IGHV4-30-4P0DP06 118 aa3.78□□□□□ -1.81
SMG1-211ENST00000565324 IGHV4-31P0DP07 118 aa3.78□□□□□ -1.81
SMG1-211ENST00000565324 C1orf137Q5JT78 98 aa3.78□□□□□ -1.81
SMG1-211ENST00000565324 Q8N3U1 123 aa3.78□□□□□ -1.81
SMG1-211ENST00000565324 DAZAP2Q15038 168 aaPredicted RBP3.77□□□□□ -1.81
SMG1-211ENST00000565324 IGF1P05019 195 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 FBXL19-AS1Q494R0 122 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 GPR179Q6PRD1 2367 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 A6NDX4 124 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 E7EUB6 86 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 LELP1Q5T871 98 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 SPRNQ5BIV9 151 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 DCANP1Q8TF63 244 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 H0Y9P7 68 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
SMG1-211ENST00000565324 ODF3BA8MYP8 253 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 TP53TG3Q9ULZ0 132 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 MUC6Q6W4X9 2439 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 EGFEM1PQ0D2K5 195 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 PLA2G2CQ5R387 149 aa3.77□□□□□ -1.81
SMG1-211ENST00000565324 TNFRSF13BO14836 293 aaPredicted RBP3.76□□□□□ -1.81
SMG1-211ENST00000565324 CACNA1AO00555 2505 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 SOSTDC1Q6X4U4 206 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 NCOR2Q9Y618 2525 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 Q8N7P7 452 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 DEFB4AO15263 64 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 CRYGAP11844 174 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 DEFB114Q30KQ6 69 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 CCDC168Q8NDH2 2452 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 BRCA2P51587 3418 aa3.76□□□□□ -1.81
SMG1-211ENST00000565324 CHCHD7Q9BUK0 85 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 DNAJC9-AS1A6NH13 148 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 Q8N6K4 173 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 PLAC8L1A1L4L8 177 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 MYO9AB2RTY4 2548 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
SMG1-211ENST00000565324 COL4A6Q14031 1691 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 TRAV10A0A0B4J240 114 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 IGLV2-11P01706 119 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
SMG1-211ENST00000565324 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
SMG1-211ENST00000565324 LINC00959A0A1B0GUT2 108 aa3.74□□□□□ -1.81
SMG1-211ENST00000565324 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
SMG1-211ENST00000565324 KLLNB2CW77 178 aa3.74□□□□□ -1.81
SMG1-211ENST00000565324 ZFP36P26651 326 aaKnown RBP3.74□□□□□ -1.81
SMG1-211ENST00000565324 RNASE3P12724 160 aaKnown RBP3.74□□□□□ -1.81
SMG1-211ENST00000565324 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 IGIPA6NJ69 53 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 LRRK2Q5S007 2527 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 LOC100131303A0A0U1RQF7 123 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 CRIP1P50238 77 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 ACYP2P14621 99 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 Q6ZS46 218 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 H3BPC8 53 aa3.73□□□□□ -1.81
SMG1-211ENST00000565324 ZNF295-AS1Q8N0V1 137 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 IGHV6-1A0A0B4J1U7 121 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 ADORA2A-AS1P86434 159 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 C1orf64Q8NEQ6 169 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 CDC42SE2Q9NRR3 84 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 DEFB1P60022 68 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 BEAN1Q3B7T3 259 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 RETNLBQ9BQ08 111 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 ZNF462Q96JM2 2506 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 CYSRT1A8MQ03 144 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 KPRPQ5T749 579 aaPredicted RBP3.72□□□□□ -1.81
SMG1-211ENST00000565324 A0A1B0GU69 56 aa3.72□□□□□ -1.81
SMG1-211ENST00000565324 GRNP28799 593 aaKnown RBP3.72□□□□□ -1.81
SMG1-211ENST00000565324 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.71□□□□□ -1.81
SMG1-211ENST00000565324 ZNF843Q8N446 348 aa3.71□□□□□ -1.81
SMG1-211ENST00000565324 ZNF702PQ9H963 129 aa3.71□□□□□ -1.81
SMG1-211ENST00000565324 PRRC2CQ9Y520 2896 aaKnown RBP3.71□□□□□ -1.81
SMG1-211ENST00000565324 POM121L12Q8N7R1 296 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 RPL37AP8A6NKH3 93 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 Q6ZTC4 211 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 X6R8D5 127 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 PRM2P04554 102 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 LINC01561Q8N1V8 128 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 HIVEP3Q5T1R4 2406 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 COL4A4P53420 1690 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms