RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
RAB40C-208ENST00000564703 CNBPP62633 177 aaKnown RBP10.39□□□□□ -0.75
RAB40C-208ENST00000564703 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
RAB40C-208ENST00000564703 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
RAB40C-208ENST00000564703 C9orf163Q8N9P6 203 aa10.39□□□□□ -0.75
RAB40C-208ENST00000564703 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
RAB40C-208ENST00000564703 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
RAB40C-208ENST00000564703 HSBP1O75506 76 aa10.38□□□□□ -0.75
RAB40C-208ENST00000564703 ATP5LO75964 103 aa10.38□□□□□ -0.75
RAB40C-208ENST00000564703 NDUFA6P56556 154 aa10.38□□□□□ -0.75
RAB40C-208ENST00000564703 PMVKQ15126 192 aa10.38□□□□□ -0.75
RAB40C-208ENST00000564703 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
RAB40C-208ENST00000564703 HERVK_113P63121 156 aa10.37□□□□□ -0.75
RAB40C-208ENST00000564703 COX6A2Q02221 97 aa10.37□□□□□ -0.75
RAB40C-208ENST00000564703 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
RAB40C-208ENST00000564703 HECTD4Q9Y4D8 3996 aa10.36□□□□□ -0.75
RAB40C-208ENST00000564703 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
RAB40C-208ENST00000564703 A0A087WZ39 114 aa10.36□□□□□ -0.75
RAB40C-208ENST00000564703 OR10D4PQ8NGN7 298 aa10.36□□□□□ -0.75
RAB40C-208ENST00000564703 A0A096LNJ9 63 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 SLPIP03973 132 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 ORAOV1Q8WV07 137 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
RAB40C-208ENST00000564703 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 A0A0J9YXV3 536 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 SPAG11BQ08648 103 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 PDZD11Q5EBL8 140 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
RAB40C-208ENST00000564703 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
RAB40C-208ENST00000564703 PACRGQ96M98 296 aaPredicted RBP10.33□□□□□ -0.76
RAB40C-208ENST00000564703 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
RAB40C-208ENST00000564703 F8WDY8 70 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 SERF1AO75920 110 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 C2orf48Q96LS8 159 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
RAB40C-208ENST00000564703 PRSS2P07478 247 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 XGP55808 180 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 IFI27L1Q96BM0 104 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 CDKN2A-AS1Q9UH64 79 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 DNAH11Q96DT5 4516 aa10.31□□□□□ -0.76
RAB40C-208ENST00000564703 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
RAB40C-208ENST00000564703 H3BRM9 83 aa10.29□□□□□ -0.76
RAB40C-208ENST00000564703 NDUFA1O15239 70 aa10.29□□□□□ -0.76
RAB40C-208ENST00000564703 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
RAB40C-208ENST00000564703 Q6ZSA8 131 aa10.29□□□□□ -0.76
RAB40C-208ENST00000564703 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
RAB40C-208ENST00000564703 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
RAB40C-208ENST00000564703 Q6ZRU5 148 aa10.28□□□□□ -0.76
RAB40C-208ENST00000564703 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
RAB40C-208ENST00000564703 HIST1H2BKO60814 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BJP06899 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BOP23527 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BBP33778 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BDP58876 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 CKS1BP61024 79 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BCP62807 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST2H2BEQ16778 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BHQ93079 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BNQ99877 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HIST1H2BMQ99879 126 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
RAB40C-208ENST00000564703 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
RAB40C-208ENST00000564703 FABP4P15090 132 aa10.26□□□□□ -0.77
RAB40C-208ENST00000564703 HAMPP81172 84 aa10.26□□□□□ -0.77
RAB40C-208ENST00000564703 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
RAB40C-208ENST00000564703 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
RAB40C-208ENST00000564703 KIAA1109Q2LD37 5005 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 LOC107984640A0A0U1RRK4 108 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 NUPR1O60356 82 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 UNQ6190/PRO20217Q6UXQ8 127 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 MRPL35Q9NZE8 188 aaKnown RBP10.25□□□□□ -0.77
RAB40C-208ENST00000564703 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
RAB40C-208ENST00000564703 DYNC1H1Q14204 4646 aaKnown RBP10.24□□□□□ -0.77
RAB40C-208ENST00000564703 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
RAB40C-208ENST00000564703 LINC00310P59036 64 aa10.24□□□□□ -0.77
RAB40C-208ENST00000564703 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
RAB40C-208ENST00000564703 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
RAB40C-208ENST00000564703 Q8IZM0 81 aa10.24□□□□□ -0.77
RAB40C-208ENST00000564703 IGKV2-24A0A0C4DH68 120 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 H0Y8G0 127 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 Q8N1X5 172 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 CIRBP-AS1Q8TBR5 109 aa10.23□□□□□ -0.77
RAB40C-208ENST00000564703 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
RAB40C-208ENST00000564703 SMIM1B2RUZ4 78 aa10.22□□□□□ -0.77
RAB40C-208ENST00000564703 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
RAB40C-208ENST00000564703 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms