RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CCL25O15444 150 aa14.9□□□□□ -0.02
LINC01960-201ENST00000563759 COX8AP10176 69 aa14.9□□□□□ -0.02
LINC01960-201ENST00000563759 SIVA1O15304 175 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 SPINK8P0C7L1 97 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 XCL1P47992 114 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 UBE2DNLQ8IWF7 75 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 PRR34Q9NV39 138 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 DNAH10OSP0CZ25 163 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 ZFAND6Q6FIF0 208 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 PCP2Q8IVA1 136 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 MIEN1Q9BRT3 115 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 UPK3BQ9BT76 320 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 TP73-AS1Q9UF72 201 aa14.89□□□□□ -0.03
LINC01960-201ENST00000563759 IGLV10-54A0A075B6I4 117 aa14.88□□□□□ -0.03
LINC01960-201ENST00000563759 UBE2WQ96B02 151 aa14.88□□□□□ -0.03
LINC01960-201ENST00000563759 TTTY13Q9BZ97 58 aa14.87□□□□□ -0.03
LINC01960-201ENST00000563759 TRAV8-3A0A0A6YYJ7 113 aa14.86□□□□□ -0.03
LINC01960-201ENST00000563759 DDTP30046 118 aa14.86□□□□□ -0.03
LINC01960-201ENST00000563759 LYSTQ99698 3801 aa14.86□□□□□ -0.03
LINC01960-201ENST00000563759 TENM2Q9NT68 2774 aa14.86□□□□□ -0.03
LINC01960-201ENST00000563759 ENHOQ6UWT2 76 aa14.86□□□□□ -0.03
LINC01960-201ENST00000563759 CHCHD10Q8WYQ3 142 aaPredicted RBP14.86□□□□□ -0.03
LINC01960-201ENST00000563759 IGHV3OR16-9A0A0B4J2B5 98 aa14.85□□□□□ -0.03
LINC01960-201ENST00000563759 STARD9Q9P2P6 4700 aa14.85□□□□□ -0.03
LINC01960-201ENST00000563759 IGHV1-58A0A0C4DH39 117 aa14.84□□□□□ -0.03
LINC01960-201ENST00000563759 LEPROTO15243 131 aa14.84□□□□□ -0.03
LINC01960-201ENST00000563759 BOD1L2Q8IYS8 172 aa14.84□□□□□ -0.03
LINC01960-201ENST00000563759 MUC7Q8TAX7 377 aa14.84□□□□□ -0.03
LINC01960-201ENST00000563759 PLEKHB2Q96CS7 222 aa14.84□□□□□ -0.03
LINC01960-201ENST00000563759 SMIM1B2RUZ4 78 aa14.83□□□□□ -0.04
LINC01960-201ENST00000563759 J3QQQ9 107 aa14.83□□□□□ -0.04
LINC01960-201ENST00000563759 LGALS3P17931 250 aaKnown RBP14.83□□□□□ -0.04
LINC01960-201ENST00000563759 TSPEAR-AS2P59090 65 aa14.83□□□□□ -0.04
LINC01960-201ENST00000563759 MIAQ16674 131 aa14.83□□□□□ -0.04
LINC01960-201ENST00000563759 CD164L2Q6UWJ8 174 aa14.82□□□□□ -0.04
LINC01960-201ENST00000563759 C5orf38Q86SI9 138 aa14.82□□□□□ -0.04
LINC01960-201ENST00000563759 HNRNPA3P51991 378 aaKnown RBP14.82□□□□□ -0.04
LINC01960-201ENST00000563759 Q9H8V8 135 aa14.82□□□□□ -0.04
LINC01960-201ENST00000563759 A0A087WZ39 114 aa14.81□□□□□ -0.04
LINC01960-201ENST00000563759 TRAV8-4A0A0B4J246 113 aa14.81□□□□□ -0.04
LINC01960-201ENST00000563759 WWC2-AS2Q96NR7 200 aa14.81□□□□□ -0.04
LINC01960-201ENST00000563759 ZNF815PA8K554 130 aa14.8□□□□□ -0.04
LINC01960-201ENST00000563759 DLEU1O43261 78 aa14.8□□□□□ -0.04
LINC01960-201ENST00000563759 PLECQ15149 4684 aaKnown RBP14.8□□□□□ -0.04
LINC01960-201ENST00000563759 MAPKAPK5-AS1Q8N8E1 139 aa14.8□□□□□ -0.04
LINC01960-201ENST00000563759 IGLV5-39A0A0G2JS06 123 aa14.79□□□□□ -0.04
LINC01960-201ENST00000563759 MYMXA0A1B0GTQ4 84 aa14.79□□□□□ -0.04
LINC01960-201ENST00000563759 C10orf126Q8N4M7 172 aa14.79□□□□□ -0.04
LINC01960-201ENST00000563759 GAGE12HA6NDE8 117 aa14.78□□□□□ -0.04
LINC01960-201ENST00000563759 COX7A2LO14548 114 aa14.78□□□□□ -0.04
LINC01960-201ENST00000563759 FOXI1Q12951 378 aa14.77□□□□□ -0.05
LINC01960-201ENST00000563759 Q9HAA7 133 aa14.77□□□□□ -0.05
LINC01960-201ENST00000563759 MALP21145 153 aa14.76□□□□□ -0.05
LINC01960-201ENST00000563759 C1orf43Q9BWL3 253 aa14.76□□□□□ -0.05
LINC01960-201ENST00000563759 TOMM7Q9P0U1 55 aa14.75□□□□□ -0.05
LINC01960-201ENST00000563759 IBA57-AS1B1ANH7 110 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 SCGB1D4Q6XE38 83 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 C2orf91Q6ZV80 131 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 IGKV2D-24A0A075B6R9 120 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 LINC01561Q8N1V8 128 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 NDUFA12Q9UI09 145 aa14.74□□□□□ -0.05
LINC01960-201ENST00000563759 K7EP13 123 aa14.73□□□□□ -0.05
LINC01960-201ENST00000563759 COX7B2Q8TF08 81 aa14.72□□□□□ -0.05
LINC01960-201ENST00000563759 ORAOV1Q8WV07 137 aa14.69□□□□□ -0.06
LINC01960-201ENST00000563759 APOMO95445 188 aa14.69□□□□□ -0.06
LINC01960-201ENST00000563759 PRSS2P07478 247 aa14.69□□□□□ -0.06
LINC01960-201ENST00000563759 LBHQ53QV2 105 aaPredicted RBP14.69□□□□□ -0.06
LINC01960-201ENST00000563759 NDUFA1O15239 70 aa14.68□□□□□ -0.06
LINC01960-201ENST00000563759 KRTAP26-1Q6PEX3 210 aa14.68□□□□□ -0.06
LINC01960-201ENST00000563759 RMI2Q96E14 147 aa14.68□□□□□ -0.06
LINC01960-201ENST00000563759 HIGD1BQ9P298 99 aa14.68□□□□□ -0.06
LINC01960-201ENST00000563759 Q8IZM0 81 aa14.67□□□□□ -0.06
LINC01960-201ENST00000563759 KRTAP1-5Q9BYS1 174 aa14.67□□□□□ -0.06
LINC01960-201ENST00000563759 DNAH1Q9P2D7 4330 aa14.66□□□□□ -0.06
LINC01960-201ENST00000563759 C6orf226Q5I0X4 101 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 TTC32Q5I0X7 151 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 CASC10Q5T4H9 136 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 CBY1Q9Y3M2 126 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 A0A0J9YXY3 114 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 CFAP161Q6P656 301 aa14.65□□□□□ -0.06
LINC01960-201ENST00000563759 ZNF625Q96I27 306 aaPredicted RBP14.64□□□□□ -0.07
LINC01960-201ENST00000563759 SPAG11BQ08648 103 aa14.63□□□□□ -0.07
LINC01960-201ENST00000563759 NBDYA0A0U1RRE5 68 aa14.62□□□□□ -0.07
LINC01960-201ENST00000563759 C3orf84H3BNL1 204 aa14.62□□□□□ -0.07
LINC01960-201ENST00000563759 HERV-K104P63124 156 aa14.62□□□□□ -0.07
LINC01960-201ENST00000563759 HSD52Q0P140 79 aa14.62□□□□□ -0.07
LINC01960-201ENST00000563759 CKS1BP61024 79 aa14.61□□□□□ -0.07
LINC01960-201ENST00000563759 SFTA2Q6UW10 78 aa14.61□□□□□ -0.07
LINC01960-201ENST00000563759 HIST1H4GQ99525 98 aa14.61□□□□□ -0.07
LINC01960-201ENST00000563759 TMEM238C9JI98 176 aa14.6□□□□□ -0.07
LINC01960-201ENST00000563759 HINT1P49773 126 aaPredicted RBP14.6□□□□□ -0.07
LINC01960-201ENST00000563759 COX11Q9Y6N1 276 aa14.6□□□□□ -0.07
LINC01960-201ENST00000563759 VPS13DQ5THJ4 4388 aa14.6□□□□□ -0.07
LINC01960-201ENST00000563759 CXCL5P42830 114 aa14.59□□□□□ -0.07
LINC01960-201ENST00000563759 SRSF9Q13242 221 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC01960-201ENST00000563759 KIAA0087Q14695 138 aa14.59□□□□□ -0.07
LINC01960-201ENST00000563759 BATFQ16520 125 aa14.59□□□□□ -0.07
LINC01960-201ENST00000563759 MEIG1Q5JSS6 88 aa14.59□□□□□ -0.07
LINC01960-201ENST00000563759 C2orf82Q6UX34 121 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms