RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
TRADD-203ENST00000563348 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
TRADD-203ENST00000563348 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
TRADD-203ENST00000563348 C10orf91Q5T1B1 145 aa12.03□□□□□ -0.48
TRADD-203ENST00000563348 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
TRADD-203ENST00000563348 IGLV4-3A0A075B6K6 122 aa12.02□□□□□ -0.49
TRADD-203ENST00000563348 A0A096LNI7 61 aa12.02□□□□□ -0.49
TRADD-203ENST00000563348 KRTAP29-1A8MX34 341 aaPredicted RBP12.02□□□□□ -0.49
TRADD-203ENST00000563348 K7EMI3 77 aa12.02□□□□□ -0.49
TRADD-203ENST00000563348 S100PP25815 95 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 ORMDL2Q53FV1 153 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 C2orf66Q6UXQ4 117 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 Q6ZRU5 148 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
TRADD-203ENST00000563348 LINC00474Q9P2X8 69 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 CYSLTR1Q9Y271 337 aa12.01□□□□□ -0.49
TRADD-203ENST00000563348 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
TRADD-203ENST00000563348 J3QL48 77 aa12□□□□□ -0.49
TRADD-203ENST00000563348 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
TRADD-203ENST00000563348 STPG4Q8N801 248 aa12□□□□□ -0.49
TRADD-203ENST00000563348 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
TRADD-203ENST00000563348 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
TRADD-203ENST00000563348 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
TRADD-203ENST00000563348 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
TRADD-203ENST00000563348 GNB1LQ9BYB4 327 aa11.99□□□□□ -0.49
TRADD-203ENST00000563348 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
TRADD-203ENST00000563348 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
TRADD-203ENST00000563348 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
TRADD-203ENST00000563348 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
TRADD-203ENST00000563348 NPSP0C0P6 89 aa11.97□□□□□ -0.49
TRADD-203ENST00000563348 TEX43Q6ZNM6 134 aa11.97□□□□□ -0.49
TRADD-203ENST00000563348 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
TRADD-203ENST00000563348 TGIF2-C20orf24A0A0A6YYL0 155 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 IGIPA6NJ69 53 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 G0S2P27469 103 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 RHEBQ15382 184 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 COX19Q49B96 90 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 C7orf33Q8WU49 177 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 AMELXQ99217 191 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 VCX2Q9H322 139 aa11.96□□□□□ -0.49
TRADD-203ENST00000563348 A0A087WZ39 114 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 F8WDY8 70 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 OXTP01178 125 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 UBE2D1P51668 147 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 Q6ZN92 141 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
TRADD-203ENST00000563348 GAGE2BQ13066 116 aa11.94□□□□□ -0.5
TRADD-203ENST00000563348 ZC2HC1BQ5TFG8 222 aa11.94□□□□□ -0.5
TRADD-203ENST00000563348 LINC00173Q6ZV60 143 aa11.94□□□□□ -0.5
TRADD-203ENST00000563348 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
TRADD-203ENST00000563348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
TRADD-203ENST00000563348 ALKBH7Q9BT30 221 aaPredicted RBP11.93□□□□□ -0.5
TRADD-203ENST00000563348 MRPL35Q9NZE8 188 aaKnown RBP11.93□□□□□ -0.5
TRADD-203ENST00000563348 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
TRADD-203ENST00000563348 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
TRADD-203ENST00000563348 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 NDUFA1O15239 70 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 MT-ND6P03923 174 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
TRADD-203ENST00000563348 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
TRADD-203ENST00000563348 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
TRADD-203ENST00000563348 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
TRADD-203ENST00000563348 MRPL18Q9H0U6 180 aaKnown RBP11.9□□□□□ -0.5
TRADD-203ENST00000563348 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
TRADD-203ENST00000563348 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
TRADD-203ENST00000563348 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
TRADD-203ENST00000563348 ERASQ7Z444 233 aa11.88□□□□□ -0.51
TRADD-203ENST00000563348 APOC3P02656 99 aa11.87□□□□□ -0.51
TRADD-203ENST00000563348 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
TRADD-203ENST00000563348 SCGB3A1Q96QR1 104 aa11.87□□□□□ -0.51
TRADD-203ENST00000563348 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
TRADD-203ENST00000563348 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
TRADD-203ENST00000563348 SEC11AP67812 179 aa11.86□□□□□ -0.51
TRADD-203ENST00000563348 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
TRADD-203ENST00000563348 C9orf116Q5BN46 136 aaPredicted RBP11.86□□□□□ -0.51
TRADD-203ENST00000563348 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
TRADD-203ENST00000563348 HERVK_113P63121 156 aa11.84□□□□□ -0.51
TRADD-203ENST00000563348 NDUFA5Q16718 116 aa11.84□□□□□ -0.51
TRADD-203ENST00000563348 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
TRADD-203ENST00000563348 SVBPQ8N300 66 aa11.84□□□□□ -0.51
TRADD-203ENST00000563348 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
TRADD-203ENST00000563348 SNAPINO95295 136 aa11.83□□□□□ -0.52
TRADD-203ENST00000563348 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
TRADD-203ENST00000563348 Q6ZRP5 223 aa11.83□□□□□ -0.52
TRADD-203ENST00000563348 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
TRADD-203ENST00000563348 GEMIN7Q9H840 131 aaKnown RBP11.82□□□□□ -0.52
TRADD-203ENST00000563348 SMCO4Q9NRQ5 59 aa11.82□□□□□ -0.52
TRADD-203ENST00000563348 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
TRADD-203ENST00000563348 PRSS2P07478 247 aa11.8□□□□□ -0.52
TRADD-203ENST00000563348 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
TRADD-203ENST00000563348 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
TRADD-203ENST00000563348 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
TRADD-203ENST00000563348 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
TRADD-203ENST00000563348 Q8IZM0 81 aa11.79□□□□□ -0.52
TRADD-203ENST00000563348 CST9LQ9H4G1 147 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms