RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.18□□□□□ -1.9
HERC1-213ENST00000561359 SYNGR2O43760 224 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 NDUFB4O95168 129 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 MT-ND6P03923 174 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 CRYGAP11844 174 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 AMTP48728 403 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 UBE2D1P51668 147 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 KRTDAPP60985 99 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 MEF2BQ02080 365 aaPredicted RBP3.18□□□□□ -1.9
HERC1-213ENST00000561359 PDE6HQ13956 83 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 MPV17L2Q567V2 206 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 GCSAMLQ5JQS6 135 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 BAGE3Q86Y29 109 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 BAGE2Q86Y30 109 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 C18orf32Q8TCD1 76 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 PTH2Q96A98 100 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 KCNS1Q96KK3 526 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 WDR61Q9GZS3 305 aaKnown RBP3.18□□□□□ -1.9
HERC1-213ENST00000561359 SS18L2Q9UHA2 77 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 HSPB8Q9UJY1 196 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 IGLV10-54A0A075B6I4 117 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 A0A096LNI7 61 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 MUC21A0A140T8X8 626 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 PRSS2P07478 247 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 RPL24P83731 157 aaKnown RBP3.17□□□□□ -1.9
HERC1-213ENST00000561359 TMEM97Q5BJF2 176 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 LINC00269Q8N2A0 174 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 C14orf178Q8N769 122 aaPredicted RBP3.17□□□□□ -1.9
HERC1-213ENST00000561359 URB1-AS1Q96HZ7 61 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 AP1S3Q96PC3 154 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 GNB1LQ9BYB4 327 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 GNG13Q9P2W3 67 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
HERC1-213ENST00000561359 LSM5Q9Y4Y9 91 aaKnown RBP3.17□□□□□ -1.9
HERC1-213ENST00000561359 TRAV21A0A0B4J279 112 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 A0A1B0GV50 99 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 SNAI2O43623 268 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 PYYP10082 97 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
HERC1-213ENST00000561359 CSN1S1P47710 185 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 SERF2P84101 59 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 SMIM20Q8N5G0 67 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 OR10G7Q8NGN6 311 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 C9orf85Q96MD7 179 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 NDFIP1Q9BT67 221 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 TMEM126AQ9H061 195 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 PSENENQ9NZ42 101 aa3.16□□□□□ -1.9
HERC1-213ENST00000561359 PIGBOS1A0A0B4J2F0 54 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 A0A1W2PPM0 123 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 A8MWV9 139 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 FNDC10F2Z333 226 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 F8W1H4 67 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 F8WDY8 70 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.91
HERC1-213ENST00000561359 KRTAP10-7P60409 375 aaPredicted RBP3.15□□□□□ -1.91
HERC1-213ENST00000561359 UBE2G1P62253 170 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 RPL36AP83881 106 aaKnown RBP3.15□□□□□ -1.91
HERC1-213ENST00000561359 FAM162BQ5T6X4 162 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 ERASQ7Z444 233 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 OR10AG1Q8NH19 301 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 ANAPC13Q9BS18 74 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 SPANXB1Q9NS25 103 aaPredicted RBP3.15□□□□□ -1.91
HERC1-213ENST00000561359 PRR34Q9NV39 138 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 SPANXCQ9NY87 97 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 TMEM14CQ9P0S9 112 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 LENEPQ9Y5L5 61 aa3.15□□□□□ -1.91
HERC1-213ENST00000561359 TRBV6-8A0A0A6YYG3 113 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 RBAKDNA6NC62 111 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 FAM24AA6NFZ4 105 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 H0Y9J4 135 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 M0QXV9 152 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 SPINK8P0C7L1 97 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 CFC1BP0CG36 223 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 FABP2P12104 132 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 SLC25A6P12236 298 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 ZNF726P1Q15940 193 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 HIGD2BQ4VC39 106 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 MIC13Q5XKP0 118 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 OR10G8Q8NGN5 311 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 MGST2Q99735 147 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 JPT2Q9H910 190 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 IL36BQ9NZH7 164 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
HERC1-213ENST00000561359 SPCS1Q9Y6A9 102 aa3.14□□□□□ -1.91
HERC1-213ENST00000561359 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 FABP5P3A8MUU1 101 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms