RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 Q6ZN92 141 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 C9orf163Q8N9P6 203 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 TRAPPC1Q9Y5R8 145 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 IGKV2-24A0A0C4DH68 120 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 MT-ND6P03923 174 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 SLPIP03973 132 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 COX19Q49B96 90 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 TEX43Q6ZNM6 134 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 FA2HQ7L5A8 372 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 TMEM141Q96I45 108 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 VCX2Q9H322 139 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 RYR1P21817 5038 aa6.54□□□□□ -1.36
HERC1-212ENST00000561348 IGLV4-3A0A075B6K6 122 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 AKR1D1P51857 326 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 COX6A2Q02221 97 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
HERC1-212ENST00000561348 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
HERC1-212ENST00000561348 GVQW2A0A096LPI5 108 aaPredicted RBP6.52□□□□□ -1.37
HERC1-212ENST00000561348 APOMO95445 188 aa6.52□□□□□ -1.37
HERC1-212ENST00000561348 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
HERC1-212ENST00000561348 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
HERC1-212ENST00000561348 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
HERC1-212ENST00000561348 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
HERC1-212ENST00000561348 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
HERC1-212ENST00000561348 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
HERC1-212ENST00000561348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
HERC1-212ENST00000561348 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 PANO1I0J062 215 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 G0S2P27469 103 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
HERC1-212ENST00000561348 SPAG11BQ08648 103 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 Q6ZSA8 131 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 FAM104AQ969W3 186 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 CARD19Q96LW7 228 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
HERC1-212ENST00000561348 HSPG2P98160 4391 aa6.5□□□□□ -1.37
HERC1-212ENST00000561348 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
HERC1-212ENST00000561348 K7EMI3 77 aa6.5□□□□□ -1.37
HERC1-212ENST00000561348 INAFM2P0DMQ5 153 aa6.5□□□□□ -1.37
HERC1-212ENST00000561348 NDUFA6P56556 154 aa6.5□□□□□ -1.37
HERC1-212ENST00000561348 MAJINQ3KP22 176 aa6.5□□□□□ -1.37
HERC1-212ENST00000561348 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
HERC1-212ENST00000561348 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
HERC1-212ENST00000561348 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
HERC1-212ENST00000561348 GEMIN7Q9H840 131 aaKnown RBP6.49□□□□□ -1.37
HERC1-212ENST00000561348 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
HERC1-212ENST00000561348 PLA2G1BP04054 148 aaKnown RBP6.48□□□□□ -1.37
HERC1-212ENST00000561348 UBE2D1P51668 147 aa6.48□□□□□ -1.37
HERC1-212ENST00000561348 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
HERC1-212ENST00000561348 PMCHL1Q16048 86 aa6.48□□□□□ -1.37
HERC1-212ENST00000561348 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
HERC1-212ENST00000561348 Q6ZRU5 148 aa6.48□□□□□ -1.37
HERC1-212ENST00000561348 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
HERC1-212ENST00000561348 A0A087WYN8 130 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 IGHV3OR16-9A0A0B4J2B5 98 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 TRGC2P03986 189 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 ERASQ7Z444 233 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
HERC1-212ENST00000561348 C12orf57Q99622 126 aa6.47□□□□□ -1.37
HERC1-212ENST00000561348 A0A096LNI7 61 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 PRSS2P07478 247 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 LINC00614P0C842 121 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 STPG4Q8N801 248 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 AMELXQ99217 191 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 TIMM17AQ99595 171 aa6.46□□□□□ -1.38
HERC1-212ENST00000561348 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.45□□□□□ -1.38
HERC1-212ENST00000561348 NDUFA1O15239 70 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BKO60814 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BJP06899 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BOP23527 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BBP33778 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BDP58876 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BCP62807 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST2H2BEQ16778 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.45□□□□□ -1.38
HERC1-212ENST00000561348 UNQ6190/PRO20217Q6UXQ8 127 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BHQ93079 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BNQ99877 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 HIST1H2BMQ99879 126 aa6.45□□□□□ -1.38
HERC1-212ENST00000561348 A0A087WZ39 114 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 HERVK_113P63121 156 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 C2orf82Q6UX34 121 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms