RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
USP3-214ENST00000559718 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
USP3-214ENST00000559718 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
USP3-214ENST00000559718 APOMO95445 188 aa7.16□□□□□ -1.26
USP3-214ENST00000559718 RPL23P62829 140 aaKnown RBP7.16□□□□□ -1.26
USP3-214ENST00000559718 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
USP3-214ENST00000559718 C9orf116Q5BN46 136 aaPredicted RBP7.16□□□□□ -1.26
USP3-214ENST00000559718 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
USP3-214ENST00000559718 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
USP3-214ENST00000559718 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 C9JQL5 133 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 PPP1R17O96001 155 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 RPL39P62891 51 aaKnown RBP7.15□□□□□ -1.26
USP3-214ENST00000559718 SPAG11BQ08648 103 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 TMEM241Q24JQ0 296 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 FAM104AQ969W3 186 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 NAT8BQ9UHF3 227 aa7.15□□□□□ -1.26
USP3-214ENST00000559718 PPP1R2P9O14990 202 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
USP3-214ENST00000559718 ADIRFQ15847 76 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 FAM74A3Q4VXF1 159 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 PHF5AQ7RTV0 110 aaKnown RBP7.14□□□□□ -1.27
USP3-214ENST00000559718 C2orf48Q96LS8 159 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 TIMM21Q9BVV7 248 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
USP3-214ENST00000559718 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
USP3-214ENST00000559718 CKS2P33552 79 aa7.13□□□□□ -1.27
USP3-214ENST00000559718 SMAGPQ0VAQ4 97 aa7.13□□□□□ -1.27
USP3-214ENST00000559718 TRBV24-1A0A075B6N3 115 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 TNFRSF6BO95407 300 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 MT-ND6P03923 174 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 SRSF3P84103 164 aaKnown RBP7.12□□□□□ -1.27
USP3-214ENST00000559718 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 TMEM18Q96B42 140 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
USP3-214ENST00000559718 IGHV3OR16-9A0A0B4J2B5 98 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 FAM168BA1KXE4 195 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 LINC00862A6NCI5 91 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 D6R8Y8 96 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 TCAPO15273 167 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 NPYP01303 97 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 RPL32P62910 135 aaKnown RBP7.11□□□□□ -1.27
USP3-214ENST00000559718 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 C10orf25Q5T742 122 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
USP3-214ENST00000559718 KRTAP11-1Q8IUC1 163 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 NAT8Q9UHE5 227 aa7.11□□□□□ -1.27
USP3-214ENST00000559718 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
USP3-214ENST00000559718 OR10D4PQ8NGN7 298 aa7.1□□□□□ -1.27
USP3-214ENST00000559718 UNQ6190/PRO20217Q6UXQ8 127 aa7.09□□□□□ -1.27
USP3-214ENST00000559718 SPANXA1Q9NS26 97 aa7.09□□□□□ -1.27
USP3-214ENST00000559718 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
USP3-214ENST00000559718 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 A0A1B0GW15 77 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 A0A1B0GXF2 115 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 IFITM10A6NMD0 228 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 HBBP68871 147 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 MRPS36P82909 103 aaKnown RBP7.08□□□□□ -1.28
USP3-214ENST00000559718 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
USP3-214ENST00000559718 A0A087WZ39 114 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 NDUFA1O15239 70 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 GAGE2EQ4V326 116 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
USP3-214ENST00000559718 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 IMMP2LQ96T52 175 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
USP3-214ENST00000559718 LPAP08519 4548 aa7.06□□□□□ -1.28
USP3-214ENST00000559718 F8W036 122 aa7.06□□□□□ -1.28
USP3-214ENST00000559718 F8WDY8 70 aa7.06□□□□□ -1.28
USP3-214ENST00000559718 PEA15Q15121 130 aa7.06□□□□□ -1.28
USP3-214ENST00000559718 S100A8P05109 93 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 LINC00242Q5T6M2 205 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
USP3-214ENST00000559718 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 TGIF2-C20orf24A0A0A6YYL0 155 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 PPBPP02775 128 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 IFI27P40305 119 aaPredicted RBP7.04□□□□□ -1.28
USP3-214ENST00000559718 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 C2orf82Q6UX34 121 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 TMEM136Q6ZRR5 245 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 ORMDL3Q8N138 153 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 PRELID3AQ96N28 172 aa7.04□□□□□ -1.28
USP3-214ENST00000559718 RAB5AP20339 215 aa7.03□□□□□ -1.28
USP3-214ENST00000559718 LOC389332A0A1B0GUA5 103 aa7.02□□□□□ -1.29
USP3-214ENST00000559718 H0Y9J4 135 aa7.02□□□□□ -1.29
USP3-214ENST00000559718 M0QXV9 152 aa7.02□□□□□ -1.29
USP3-214ENST00000559718 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
USP3-214ENST00000559718 TMEM141Q96I45 108 aa7.02□□□□□ -1.29
USP3-214ENST00000559718 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
USP3-214ENST00000559718 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
USP3-214ENST00000559718 UBE2D1P51668 147 aa7.01□□□□□ -1.29
USP3-214ENST00000559718 ATP5L2Q7Z4Y8 100 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms