RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 KIR2DL4Q99706 377 aa10.8□□□□□ -0.68
ABCD4-228ENST00000557588 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
ABCD4-228ENST00000557588 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
ABCD4-228ENST00000557588 TMEM18Q96B42 140 aa10.79□□□□□ -0.68
ABCD4-228ENST00000557588 A0A087X002 238 aa10.78□□□□□ -0.68
ABCD4-228ENST00000557588 HIGD1CA8MV81 97 aa10.78□□□□□ -0.68
ABCD4-228ENST00000557588 PPP1R17O96001 155 aa10.78□□□□□ -0.68
ABCD4-228ENST00000557588 NDUFC2-KCTD14E9PQ53 114 aa10.77□□□□□ -0.69
ABCD4-228ENST00000557588 C9orf129Q5T035 196 aaKnown RBP10.77□□□□□ -0.69
ABCD4-228ENST00000557588 TRBV30A0A0K0K1B3 111 aa10.76□□□□□ -0.69
ABCD4-228ENST00000557588 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
ABCD4-228ENST00000557588 PPP1R2P9O14990 202 aa10.75□□□□□ -0.69
ABCD4-228ENST00000557588 NUPR1O60356 82 aa10.75□□□□□ -0.69
ABCD4-228ENST00000557588 RGS21Q2M5E4 152 aa10.75□□□□□ -0.69
ABCD4-228ENST00000557588 TMEM250H0YL14 139 aa10.74□□□□□ -0.69
ABCD4-228ENST00000557588 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
ABCD4-228ENST00000557588 MRPS36P82909 103 aaKnown RBP10.74□□□□□ -0.69
ABCD4-228ENST00000557588 SPANXA1Q9NS26 97 aa10.74□□□□□ -0.69
ABCD4-228ENST00000557588 TPRXLQ17RH7 258 aa10.73□□□□□ -0.69
ABCD4-228ENST00000557588 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
ABCD4-228ENST00000557588 IFITM10A6NMD0 228 aa10.72□□□□□ -0.69
ABCD4-228ENST00000557588 CRYGAP11844 174 aa10.72□□□□□ -0.69
ABCD4-228ENST00000557588 HBBP68871 147 aa10.72□□□□□ -0.69
ABCD4-228ENST00000557588 TGIF2-C20orf24A0A0A6YYL0 155 aa10.71□□□□□ -0.69
ABCD4-228ENST00000557588 TCAPO15273 167 aa10.71□□□□□ -0.69
ABCD4-228ENST00000557588 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
ABCD4-228ENST00000557588 C20orf78Q9BR46 151 aa10.71□□□□□ -0.69
ABCD4-228ENST00000557588 C2orf82Q6UX34 121 aa10.7□□□□□ -0.7
ABCD4-228ENST00000557588 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
ABCD4-228ENST00000557588 CTDSP1Q9GZU7 261 aa10.7□□□□□ -0.7
ABCD4-228ENST00000557588 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
ABCD4-228ENST00000557588 RIGQ13278 110 aa10.69□□□□□ -0.7
ABCD4-228ENST00000557588 PACRGQ96M98 296 aaPredicted RBP10.69□□□□□ -0.7
ABCD4-228ENST00000557588 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
ABCD4-228ENST00000557588 RPL28P46779 137 aaKnown RBP10.68□□□□□ -0.7
ABCD4-228ENST00000557588 LINC01551Q86U37 167 aa10.68□□□□□ -0.7
ABCD4-228ENST00000557588 BATF3Q9NR55 127 aa10.68□□□□□ -0.7
ABCD4-228ENST00000557588 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
ABCD4-228ENST00000557588 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
ABCD4-228ENST00000557588 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-228ENST00000557588 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
ABCD4-228ENST00000557588 BCE1O60756 84 aa10.66□□□□□ -0.7
ABCD4-228ENST00000557588 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
ABCD4-228ENST00000557588 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
ABCD4-228ENST00000557588 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
ABCD4-228ENST00000557588 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
ABCD4-228ENST00000557588 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
ABCD4-228ENST00000557588 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
ABCD4-228ENST00000557588 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
ABCD4-228ENST00000557588 V9GYV3 84 aa10.64□□□□□ -0.71
ABCD4-228ENST00000557588 ZNF727A8MUV8 499 aa10.63□□□□□ -0.71
ABCD4-228ENST00000557588 CEBPGP53567 150 aa10.63□□□□□ -0.71
ABCD4-228ENST00000557588 SLC51BQ86UW2 128 aa10.63□□□□□ -0.71
ABCD4-228ENST00000557588 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
ABCD4-228ENST00000557588 SMIM7Q9BQ49 75 aa10.63□□□□□ -0.71
ABCD4-228ENST00000557588 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
ABCD4-228ENST00000557588 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
ABCD4-228ENST00000557588 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
ABCD4-228ENST00000557588 LINC00304Q8N9R0 145 aa10.62□□□□□ -0.71
ABCD4-228ENST00000557588 FSIP2Q5CZC0 6907 aa10.62□□□□□ -0.71
ABCD4-228ENST00000557588 CKS2P33552 79 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
ABCD4-228ENST00000557588 LINC00173Q6ZV60 143 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 ANAPC11Q9NYG5 84 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
ABCD4-228ENST00000557588 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
ABCD4-228ENST00000557588 FAM229BQ4G0N7 80 aa10.6□□□□□ -0.71
ABCD4-228ENST00000557588 CRCT1Q9UGL9 99 aa10.6□□□□□ -0.71
ABCD4-228ENST00000557588 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
ABCD4-228ENST00000557588 CTAG1AP78358 180 aa10.59□□□□□ -0.71
ABCD4-228ENST00000557588 KRTAP13-1Q8IUC0 172 aa10.58□□□□□ -0.72
ABCD4-228ENST00000557588 D6R8Y8 96 aa10.57□□□□□ -0.72
ABCD4-228ENST00000557588 NPYP01303 97 aa10.57□□□□□ -0.72
ABCD4-228ENST00000557588 PRSS2P07478 247 aa10.57□□□□□ -0.72
ABCD4-228ENST00000557588 CKS1BP61024 79 aa10.57□□□□□ -0.72
ABCD4-228ENST00000557588 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
ABCD4-228ENST00000557588 A0A1B0GW15 77 aa10.56□□□□□ -0.72
ABCD4-228ENST00000557588 FAM74A3Q4VXF1 159 aa10.56□□□□□ -0.72
ABCD4-228ENST00000557588 Q8IZM0 81 aa10.56□□□□□ -0.72
ABCD4-228ENST00000557588 Q6ZN92 141 aa10.55□□□□□ -0.72
ABCD4-228ENST00000557588 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
ABCD4-228ENST00000557588 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
ABCD4-228ENST00000557588 BLOC1S1P78537 153 aa10.54□□□□□ -0.72
ABCD4-228ENST00000557588 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
ABCD4-228ENST00000557588 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
ABCD4-228ENST00000557588 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
ABCD4-228ENST00000557588 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
ABCD4-228ENST00000557588 LINC00167Q96N53 147 aa10.53□□□□□ -0.72
ABCD4-228ENST00000557588 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
ABCD4-228ENST00000557588 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
ABCD4-228ENST00000557588 RPL37AP8A6NKH3 93 aa10.52□□□□□ -0.73
ABCD4-228ENST00000557588 F8VRH5 84 aa10.52□□□□□ -0.73
ABCD4-228ENST00000557588 RAB5AP20339 215 aa10.52□□□□□ -0.73
ABCD4-228ENST00000557588 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
ABCD4-228ENST00000557588 PPBPP02775 128 aa10.51□□□□□ -0.73
ABCD4-228ENST00000557588 TCTE3Q8IZS6 198 aa10.51□□□□□ -0.73
ABCD4-228ENST00000557588 ALKBH7Q9BT30 221 aaPredicted RBP10.51□□□□□ -0.73
ABCD4-228ENST00000557588 F8W036 122 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms