RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 USH2AO75445 5202 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 C17orf112F2Z3M2 114 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 M0QXV9 152 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 CCL25O15444 150 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 NOL3O60936 208 aaKnown RBP1.97□□□□□ -2.09
CHD8-212ENST00000557329 TAS2R30P59541 319 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 DEFA1P59665 94 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 MRPS10P82664 201 aaKnown RBP1.97□□□□□ -2.09
CHD8-212ENST00000557329 FLI1Q01543 452 aaPredicted RBP1.97□□□□□ -2.09
CHD8-212ENST00000557329 COX19Q49B96 90 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 SAPCD1Q5SSQ6 148 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 BTF3L4Q96K17 158 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 VCX3BQ9H321 246 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 VCX3AQ9NNX9 186 aa1.97□□□□□ -2.09
CHD8-212ENST00000557329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 ANKRD20A5PA0PJZ0 165 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 C9orf170A2RU37 121 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 ATP5LO75964 103 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 SULT1A1P50225 295 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 TMBIM6P55061 237 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 MEF2BQ02080 365 aaPredicted RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 SSBP1Q04837 148 aaKnown RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 COTL1Q14019 142 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 ATP6V1FQ16864 119 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 IQCJQ1A5X6 159 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 PYDC2Q56P42 97 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 TOMM5Q8N4H5 51 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 DAND5Q8N907 189 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 SCGB1C1Q8TD33 95 aa1.96□□□□□ -2.1
CHD8-212ENST00000557329 ZNF471Q9BX82 626 aaPredicted RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 MRPS26Q9BYN8 205 aaKnown RBP1.96□□□□□ -2.1
CHD8-212ENST00000557329 IGSF23A1L1A6 192 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 C19orf71A6NCJ1 209 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 PCP4L1A6NKN8 68 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 KRBOX1C9JBD0 128 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 SH2D1AO60880 128 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 TCRAP04437 139 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
CHD8-212ENST00000557329 C5orf38Q86SI9 138 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 NUP35Q8NFH5 326 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 OR2D3Q8NGH3 330 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 OR5C1Q8NGR4 320 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 SMIM4Q8WVI0 70 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 IMMP2LQ96T52 175 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 SLC25A21Q9BQT8 299 aaPredicted RBP1.95□□□□□ -2.1
CHD8-212ENST00000557329 Q9H521 79 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 KCNIP2Q9NS61 270 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 FLVCR2Q9UPI3 526 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
CHD8-212ENST00000557329 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 SERTM2A0A1B0GWG4 89 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 COX7A2LO14548 114 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 AP3S2P59780 193 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 UBE2G1P62253 170 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 SPAG11BQ08648 103 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 OR10AG1Q8NH19 301 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 MARVELD1Q9BSK0 173 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 SMIM3Q9BZL3 60 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 RSL24D1Q9UHA3 163 aaKnown RBP1.94□□□□□ -2.1
CHD8-212ENST00000557329 NDUFA12Q9UI09 145 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 ALG5Q9Y673 324 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
CHD8-212ENST00000557329 TRAV13-1A0A0B4J241 112 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 APCSP02743 223 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 ARL14EPLP0DKL9 152 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 PMCHP20382 165 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 UBE2G2P60604 165 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 Q5W150 140 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 LINC00469Q8N7U9 141 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 WDR61Q9GZS3 305 aaKnown RBP1.93□□□□□ -2.1
CHD8-212ENST00000557329 LINC00846Q9NV44 126 aa1.93□□□□□ -2.1
CHD8-212ENST00000557329 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
CHD8-212ENST00000557329 NDUFA1O15239 70 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 NUPR1O60356 82 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 OR5AL1P0C617 328 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 BTCP35070 178 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 CRIP1P50238 77 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 RNASE13Q5GAN3 156 aaKnown RBP1.92□□□□□ -2.1
CHD8-212ENST00000557329 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 FP248Q71RG6 208 aaPredicted RBP1.92□□□□□ -2.1
CHD8-212ENST00000557329 ORAOV1Q8WV07 137 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 AP1S3Q96PC3 154 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 NIT2Q9NQR4 276 aa1.92□□□□□ -2.1
CHD8-212ENST00000557329 A0A087WXM4 84 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 COLCA2A8K830 154 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 M0QY20 66 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 BCE1O60756 84 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 NDUFB6O95139 128 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 ESDP10768 282 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 GCHFRP30047 84 aa1.91□□□□□ -2.1
CHD8-212ENST00000557329 CDC34P49427 236 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms