RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 LOC389332A0A1B0GUA5 103 aa6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 IFI27P40305 119 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 REG3GQ6UW15 175 aa6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 OR10D4PQ8NGN7 298 aa6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 PRELID3AQ96N28 172 aa6.59□□□□□ -1.35
SPTLC2-205ENST00000556607 TGIF2-C20orf24A0A0A6YYL0 155 aa6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 A0A1B0GXF2 115 aa6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 ATP5L2Q7Z4Y8 100 aa6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
SPTLC2-205ENST00000556607 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
SPTLC2-205ENST00000556607 NDUFA1O15239 70 aa6.57□□□□□ -1.36
SPTLC2-205ENST00000556607 MT-ND6P03923 174 aa6.57□□□□□ -1.36
SPTLC2-205ENST00000556607 RAB14P61106 215 aa6.57□□□□□ -1.36
SPTLC2-205ENST00000556607 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
SPTLC2-205ENST00000556607 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
SPTLC2-205ENST00000556607 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
SPTLC2-205ENST00000556607 PHF5AQ7RTV0 110 aaKnown RBP6.56□□□□□ -1.36
SPTLC2-205ENST00000556607 IMMP2LQ96T52 175 aa6.56□□□□□ -1.36
SPTLC2-205ENST00000556607 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
SPTLC2-205ENST00000556607 IGHV3OR16-9A0A0B4J2B5 98 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 PNRC1Q12796 327 aaPredicted RBP6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 C1orf137Q5JT78 98 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 MRPL35Q9NZE8 188 aaKnown RBP6.55□□□□□ -1.36
SPTLC2-205ENST00000556607 F8WDY8 70 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 GAGE2EQ4V326 116 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 Q6ZN92 141 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 C2orf88Q9BSF0 95 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 GAGE2DQ9UEU5 116 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
SPTLC2-205ENST00000556607 IGLV4-3A0A075B6K6 122 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 ODF1Q14990 250 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 CYSLTR1Q9Y271 337 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 LAMTOR2Q9Y2Q5 125 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
SPTLC2-205ENST00000556607 A0A087WZ39 114 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 PRSS2P07478 247 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 Q8N8P6 123 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 PACRGQ96M98 296 aaPredicted RBP6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 VCX2Q9H322 139 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 TOMM7Q9P0U1 55 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 C6orf48Q9UBA6 75 aa6.52□□□□□ -1.37
SPTLC2-205ENST00000556607 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
SPTLC2-205ENST00000556607 PRSS47A8MTI9 375 aa6.51□□□□□ -1.37
SPTLC2-205ENST00000556607 UBE2BP63146 152 aa6.51□□□□□ -1.37
SPTLC2-205ENST00000556607 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
SPTLC2-205ENST00000556607 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
SPTLC2-205ENST00000556607 UBE2D1P51668 147 aa6.5□□□□□ -1.37
SPTLC2-205ENST00000556607 TRBV30A0A0K0K1B3 111 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 TLX1NBP0CAT3 122 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 CKS1BP61024 79 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 KIAA1644Q3SXP7 199 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 NXT2Q9NPJ8 142 aaKnown RBP6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
SPTLC2-205ENST00000556607 M0QXV9 152 aa6.48□□□□□ -1.37
SPTLC2-205ENST00000556607 IGLV7-43P04211 117 aa6.48□□□□□ -1.37
SPTLC2-205ENST00000556607 G0S2P27469 103 aa6.48□□□□□ -1.37
SPTLC2-205ENST00000556607 KIAA0087Q14695 138 aa6.48□□□□□ -1.37
SPTLC2-205ENST00000556607 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
SPTLC2-205ENST00000556607 NDUFC2-KCTD14E9PQ53 114 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 K7EMI3 77 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 SEC11AP67812 179 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 DIRC1Q969H9 104 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 AMELXQ99217 191 aa6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
SPTLC2-205ENST00000556607 HERVK_113P63121 156 aa6.46□□□□□ -1.38
SPTLC2-205ENST00000556607 LINC01561Q8N1V8 128 aa6.46□□□□□ -1.38
SPTLC2-205ENST00000556607 LINC00469Q8N7U9 141 aa6.46□□□□□ -1.38
SPTLC2-205ENST00000556607 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 NPSP0C0P6 89 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 S100PP25815 95 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 CLLU1Q5K131 121 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 Q8IZM0 81 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 SCGB3A1Q96QR1 104 aa6.45□□□□□ -1.38
SPTLC2-205ENST00000556607 C9orf129Q5T035 196 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-205ENST00000556607 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
SPTLC2-205ENST00000556607 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
SPTLC2-205ENST00000556607 TIMM17AQ99595 171 aa6.44□□□□□ -1.38
SPTLC2-205ENST00000556607 CDKN2A-AS1Q9UH64 79 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms