RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GCSAMLQ5JQS6 135 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 SPINK6Q6UWN8 80 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 ENHOQ6UWT2 76 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 Q6ZRP5 223 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 MIR17HGQ75NE6 70 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 ATP5L2Q7Z4Y8 100 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 FXYD5Q96DB9 178 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 SAMD10Q9BYL1 202 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 PLAC8Q9NZF1 115 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 KIF25-AS1Q9Y6Z4 181 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 TRBV20OR9-2A0A075B6H5 130 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 IGHV3-64A0A075B6Q5 118 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 A0A087WZ39 114 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-239ENST00000556315 H7C423 109 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 PMCHP20382 165 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 UBE2G2P60604 165 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
ATXN3-239ENST00000556315 MIAQ16674 131 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 COX8CQ7Z4L0 72 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 BAGE2Q86Y30 109 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 ARL6IP6Q8N6S5 226 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 GTSF1Q8WW33 167 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 C9orf85Q96MD7 179 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 Q9UF83 564 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 V9GYV3 84 aa3.01□□□□□ -1.93
ATXN3-239ENST00000556315 TRBV6-1A0A0K0K1D8 114 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 A0A1B0GW15 77 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 K7EN84 100 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 OR7C2O60412 319 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 APCSP02743 223 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 OR5AL1P0C617 328 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 PRR3P79522 188 aaKnown RBP3□□□□□ -1.93
ATXN3-239ENST00000556315 CENPWQ5EE01 88 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 UFSP1Q6NVU6 142 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 TMEM136Q6ZRR5 245 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 C14orf178Q8N769 122 aaPredicted RBP3□□□□□ -1.93
ATXN3-239ENST00000556315 OR2D3Q8NGH3 330 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 SPACA4Q8TDM5 124 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 BORCS7Q96B45 105 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 CHCHD1Q96BP2 118 aaKnown RBP3□□□□□ -1.93
ATXN3-239ENST00000556315 OTORQ9NRC9 128 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 UQCR10Q9UDW1 63 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 NAT8BQ9UHF3 227 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 LPAP08519 4548 aa3□□□□□ -1.93
ATXN3-239ENST00000556315 TRBV6-8A0A0A6YYG3 113 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 A8MWL6 223 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 SERF1AO75920 110 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
ATXN3-239ENST00000556315 CHTF8P0CG12 524 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 RNASE3P12724 160 aaKnown RBP2.99□□□□□ -1.93
ATXN3-239ENST00000556315 RPS20P60866 119 aaKnown RBP2.99□□□□□ -1.93
ATXN3-239ENST00000556315 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 GOLT1AQ6ZVE7 132 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 TSKUQ8WUA8 353 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 FAM218AQ96MZ4 157 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 NDFIP1Q9BT67 221 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-239ENST00000556315 TRBV7-3A0A075B6L6 115 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 SERTM2A0A1B0GWG4 89 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 A4D1N5 150 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 H7C1H1 209 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 PEX7O00628 323 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 S100A4P26447 101 aaKnown RBP2.98□□□□□ -1.93
ATXN3-239ENST00000556315 CTRLP40313 264 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-239ENST00000556315 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-239ENST00000556315 UBE2D3P61077 147 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 UBE2G1P62253 170 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 UBE2D2P62837 147 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 UBE2L3P68036 154 aaKnown RBP2.98□□□□□ -1.93
ATXN3-239ENST00000556315 MPV17L2Q567V2 206 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 TMEM75Q8N9X5 138 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 C5orf17Q8NAS9 161 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 JPT2Q9H910 190 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 EPDR1Q9UM22 224 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 ZFP30Q9Y2G7 519 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 MUC2Q02817 5179 aa2.98□□□□□ -1.93
ATXN3-239ENST00000556315 TRAV8-4A0A0B4J246 113 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 GRIFINA4D1Z8 144 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 K7EQM0 130 aa2.97□□□□□ -1.93
ATXN3-239ENST00000556315 NUPR1O60356 82 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms