RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 Q6ZN92 141 aa5.04□□□□□ -1.6
ABCD4-220ENST00000553998 Q6ZUT4 128 aa5.04□□□□□ -1.6
ABCD4-220ENST00000553998 BAGE3Q86Y29 109 aa5.04□□□□□ -1.6
ABCD4-220ENST00000553998 URB1-AS1Q96HZ7 61 aa5.04□□□□□ -1.6
ABCD4-220ENST00000553998 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
ABCD4-220ENST00000553998 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 LINC00959A0A1B0GUT2 108 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 C1orf196B1AJZ1 125 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 HBDP02042 147 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 SS18Q15532 418 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 TEX43Q6ZNM6 134 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 ERASQ7Z444 233 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 CIRBP-AS1Q8TBR5 109 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 FAM104AQ969W3 186 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
ABCD4-220ENST00000553998 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 A0A096LNJ9 63 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 TRAV13-1A0A0B4J241 112 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 IGKV3OR2-268A0A0C4DH90 116 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 IFITM10A6NMD0 228 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 HSBP1O75506 76 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 CD164L2Q6UWJ8 174 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 CHCHD10Q8WYQ3 142 aaPredicted RBP5.02□□□□□ -1.61
ABCD4-220ENST00000553998 AMELXQ99217 191 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 C2orf88Q9BSF0 95 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 VCX2Q9H322 139 aa5.02□□□□□ -1.61
ABCD4-220ENST00000553998 GAGE12HA6NDE8 117 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BKO60814 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 ATP5LO75964 103 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BJP06899 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BOP23527 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BBP33778 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BDP58876 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BCP62807 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST2H2BEQ16778 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 C14orf177Q52M58 125 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 PDZD11Q5EBL8 140 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 RNASE13Q5GAN3 156 aaKnown RBP5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BHQ93079 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BNQ99877 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 HIST1H2BMQ99879 126 aa5.01□□□□□ -1.61
ABCD4-220ENST00000553998 OPRPNQ99935 248 aaPredicted RBP5.01□□□□□ -1.61
ABCD4-220ENST00000553998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5□□□□□ -1.61
ABCD4-220ENST00000553998 SERF1AO75920 110 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 XCL1P47992 114 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 HNRNPA3P51991 378 aaKnown RBP5□□□□□ -1.61
ABCD4-220ENST00000553998 LINC00310P59036 64 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 SEC11AP67812 179 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 FOXI1Q12951 378 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 CFAP161Q6P656 301 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 FAM19A3Q7Z5A8 133 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 BAALCQ8WXS3 180 aa5□□□□□ -1.61
ABCD4-220ENST00000553998 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 UBE2D1P51668 147 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 PMVKQ15126 192 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 PMCHL1Q16048 86 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 LINC01620Q4KN68 170 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 COA6Q5JTJ3 125 aaKnown RBP4.99□□□□□ -1.61
ABCD4-220ENST00000553998 LINC00173Q6ZV60 143 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 CST9LQ9H4G1 147 aa4.99□□□□□ -1.61
ABCD4-220ENST00000553998 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.98□□□□□ -1.61
ABCD4-220ENST00000553998 IGHV3OR16-9A0A0B4J2B5 98 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 COX7A2LO14548 114 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 LECT2O14960 151 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 RPL37AP61513 92 aaKnown RBP4.98□□□□□ -1.61
ABCD4-220ENST00000553998 LINC00242Q5T6M2 205 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 Q6ZRU5 148 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
ABCD4-220ENST00000553998 PACRGQ96M98 296 aaPredicted RBP4.98□□□□□ -1.61
ABCD4-220ENST00000553998 TRAV12-1A0A0B4J245 112 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 IGHV1-58A0A0C4DH39 117 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 NUPR1O60356 82 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 LEPROTL1O95214 131 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 APOMO95445 188 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 MALP21145 153 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 HERVK_113P63121 156 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 FAM19A2Q8N3H0 131 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 IFI27L1Q96BM0 104 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 HSPB8Q9UJY1 196 aa4.97□□□□□ -1.61
ABCD4-220ENST00000553998 A0A087WZ39 114 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 GVQW2A0A096LPI5 108 aaPredicted RBP4.96□□□□□ -1.62
ABCD4-220ENST00000553998 TINCRA0A1B0GVN0 87 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 PRSS1P07477 247 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 C5orf38Q86SI9 138 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 C15orf56Q8N910 161 aa4.96□□□□□ -1.62
ABCD4-220ENST00000553998 GEMIN7Q9H840 131 aaKnown RBP4.96□□□□□ -1.62
ABCD4-220ENST00000553998 IGLV5-45A0A087WSX0 123 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 A0A0J9YXV3 536 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 hDV102S1A0JD36 115 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 IGLC3P0DOY3 106 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 NDUFA6P56556 154 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
ABCD4-220ENST00000553998 COX6A2Q02221 97 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 OR10D4PQ8NGN7 298 aa4.95□□□□□ -1.62
ABCD4-220ENST00000553998 IGHV3-64A0A075B6Q5 118 aa4.94□□□□□ -1.62
ABCD4-220ENST00000553998 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms