RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, human

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCC2-215	ENST00000552931	CDC42SE2	Q9NRR3	84 aa		3.86	□□□□□ -1.79
SMARCC2-215	ENST00000552931	LINC00474	Q9P2X8	69 aa		3.86	□□□□□ -1.79
SMARCC2-215	ENST00000552931		V9GYV3	84 aa		3.86	□□□□□ -1.79
SMARCC2-215	ENST00000552931	TNXB	P22105	4242 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	IGHV3-64	A0A075B6Q5	118 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	SMIM27	A0A1W2PRY6	76 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	APCS	P02743	223 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	PRSS2	P07478	247 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	FGF6	P10767	208 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	RPS10	P46783	165 aa	Known RBP	3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	TMEM241	Q24JQ0	296 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	SPACA4	Q8TDM5	124 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	C20orf78	Q9BR46	151 aa		3.85	□□□□□ -1.79
SMARCC2-215	ENST00000552931	LINC00959	A0A1B0GUT2	108 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	ZNF727	A8MUV8	499 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	HLA-DQA1	P01909	254 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	FAM104B	Q5XKR9	115 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	NRAC	Q8N912	160 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	NUP35	Q8NFH5	326 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	BORCS7	Q96B45	105 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	RPL39L	Q96EH5	51 aa	Known RBP	3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	EIF5A2	Q9GZV4	153 aa	Known RBP	3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	ST20	Q9HBF5	79 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	NAT8B	Q9UHF3	227 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	HMCN2	Q8NDA2	5059 aa		3.84	□□□□□ -1.79
SMARCC2-215	ENST00000552931	TRAV26-2	A0A0B4J265	109 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IGHV1-58	A0A0C4DH39	117 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	LOC100996750	A0A140TA64	210 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	C7orf77	A4D0Y5	90 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	C1orf196	B1AJZ1	125 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	PANO1	I0J062	215 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	PPBP	P02775	128 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	RPL37A	P61513	92 aa	Known RBP	3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	RPL23	P62829	140 aa	Known RBP	3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	HAMP	P81172	84 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	TAL2	Q16559	108 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	ZNF664	Q8N3J9	261 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	BTF3L4	Q96K17	158 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	KRTAP4-6	Q9BYQ5	205 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931	NAT8	Q9UHE5	227 aa		3.83	□□□□□ -1.8
SMARCC2-215	ENST00000552931		A0A087WYN8	130 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931		A0A1B0GXF2	115 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	S100A8	P05109	93 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	CEBPG	P53567	150 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	MRPS36	P82909	103 aa	Known RBP	3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	PEA15	Q15121	130 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	LINC00242	Q5T6M2	205 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	AMMECR1L	Q6DCA0	310 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	ATP5L2	Q7Z4Y8	100 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	TMEM101	Q96IK0	257 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	KIR2DL4	Q99706	377 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	LAMTOR2	Q9Y2Q5	125 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931	UBE2D4	Q9Y2X8	147 aa		3.82	□□□□□ -1.8
SMARCC2-215	ENST00000552931		C9JQL5	133 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931		K7EMI3	77 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	GAS8-AS1	O95177	125 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	MT1HL1	P0DM35	61 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	SS18	Q15532	418 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	CLPSL2	Q6UWE3	100 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	AMN1	Q8IY45	258 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	FAM104A	Q969W3	186 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	PYGO1	Q9Y3Y4	419 aa		3.81	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931		F8W036	122 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	TLX1NB	P0CAT3	122 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	HNRNPA3	P51991	378 aa	Known RBP	3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	COX6A2	Q02221	97 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	COX19	Q49B96	90 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	MRPL51	Q4U2R6	128 aa	Known RBP	3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	C7orf33	Q8WU49	177 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	KRTAP3-1	Q9BYR8	98 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	SPANXA1	Q9NS26	97 aa		3.8	□□□□□ -1.8
SMARCC2-215	ENST00000552931	HBB	P68871	147 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	SPINK6	Q6UWN8	80 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	FAM19A3	Q7Z5A8	133 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	OR10D4P	Q8NGN7	298 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	LINC01600	Q96MT4	127 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	SMIM2	Q9BVW6	85 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	TMEM242	Q9NWH2	141 aa		3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	MRPL35	Q9NZE8	188 aa	Known RBP	3.79	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IGLV4-69	A0A075B6H9	119 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931		A0A1B0GVG6	124 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931		A0A1B0GWB2	263 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931	COX7A2L	O14548	114 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931	APOM	O95445	188 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931	SYCN	Q0VAF6	134 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931	CARD19	Q96LW7	228 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931	IMMP2L	Q96T52	175 aa		3.78	□□□□□ -1.8
SMARCC2-215	ENST00000552931		A0A096LNI7	61 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	LOC107984640	A0A0U1RRK4	108 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	LINC01549	A6NIU2	74 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931		E9PLD3	99 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	FCER1G	P30273	86 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	CKS2	P33552	79 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	XCL1	P47992	114 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	KRTAP10-8	P60410	259 aa		3.77	□□□□□ -1.81
SMARCC2-215	ENST00000552931	PRR3	P79522	188 aa	Known RBP	3.77	□□□□□ -1.81

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