RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 CTRLP40313 264 aa4.36□□□□□ -1.71
PRIM1-208ENST00000552590 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
PRIM1-208ENST00000552590 Q86TA4 180 aa4.36□□□□□ -1.71
PRIM1-208ENST00000552590 SCGB1C1Q8TD33 95 aa4.36□□□□□ -1.71
PRIM1-208ENST00000552590 NDUFA1O15239 70 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 PLA2G10O15496 165 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 UPK1BO75841 260 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 IL7P13232 177 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 UBE2AP49459 152 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
PRIM1-208ENST00000552590 Q8NBF4 154 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 AP1S3Q96PC3 154 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 NIT2Q9NQR4 276 aa4.35□□□□□ -1.71
PRIM1-208ENST00000552590 STAG3L2P0CL84 134 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 STAG3L3P0CL85 134 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
PRIM1-208ENST00000552590 NTF3P20783 257 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 CDC34P49427 236 aaPredicted RBP4.34□□□□□ -1.71
PRIM1-208ENST00000552590 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 TMEM101Q96IK0 257 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 BTF3L4Q96K17 158 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 HSPB11Q9Y547 144 aa4.34□□□□□ -1.71
PRIM1-208ENST00000552590 H7C423 109 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 LYRM1O43325 122 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 SPINK1P00995 79 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 OR5AL1P0C617 328 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 UBE2G2P60604 165 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 NDUFA5Q16718 116 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 Q8N377 158 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 ALG5Q9Y673 324 aa4.33□□□□□ -1.72
PRIM1-208ENST00000552590 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 PEX7O00628 323 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 SNAI2O43623 268 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 AKAP14Q86UN6 197 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 FAM19A2Q8N3H0 131 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
PRIM1-208ENST00000552590 C1orf196B1AJZ1 125 aa4.31□□□□□ -1.72
PRIM1-208ENST00000552590 APCSP02743 223 aa4.31□□□□□ -1.72
PRIM1-208ENST00000552590 MRPL55Q7Z7F7 128 aaKnown RBP4.31□□□□□ -1.72
PRIM1-208ENST00000552590 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
PRIM1-208ENST00000552590 MARVELD1Q9BSK0 173 aa4.31□□□□□ -1.72
PRIM1-208ENST00000552590 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 F8WDY8 70 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 LGALS3P17931 250 aaKnown RBP4.3□□□□□ -1.72
PRIM1-208ENST00000552590 COX8CQ7Z4L0 72 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 PPP1R1CQ8WVI7 109 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 PACRGQ96M98 296 aaPredicted RBP4.3□□□□□ -1.72
PRIM1-208ENST00000552590 TMEM167BQ9NRX6 74 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 CXorf1O96002 111 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 H2BFSP57053 126 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 LINC00469Q8N7U9 141 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
PRIM1-208ENST00000552590 TRAV13-1A0A0B4J241 112 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 MPC2O95563 127 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 NCR2O95944 276 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 S100A1P23297 94 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 PRLHP81277 87 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 IFITM3Q01628 133 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
PRIM1-208ENST00000552590 FAM74A7A6NL05 159 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 SLC25A20O43772 301 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 LTAP01374 205 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 ATP6V0CP27449 155 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 UBE2G1P62253 170 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 ZNF726P1Q15940 193 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
PRIM1-208ENST00000552590 ENKURQ8TC29 256 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 XAGE1AQ9HD64 81 aa4.28□□□□□ -1.72
PRIM1-208ENST00000552590 ATP6V1G1O75348 118 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 CXCL1P09341 107 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 HIST1H2BAQ96A08 127 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 FMC1Q96HJ9 113 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
PRIM1-208ENST00000552590 CYTL1Q9NRR1 136 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
PRIM1-208ENST00000552590 FAM240BA0A1B0GVZ2 78 aa4.26□□□□□ -1.73
PRIM1-208ENST00000552590 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
PRIM1-208ENST00000552590 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
PRIM1-208ENST00000552590 LYZL1Q6UWQ5 148 aa4.25□□□□□ -1.73
PRIM1-208ENST00000552590 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
PRIM1-208ENST00000552590 RPL39LQ96EH5 51 aaKnown RBP4.25□□□□□ -1.73
PRIM1-208ENST00000552590 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 AKR1C3P42330 323 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
PRIM1-208ENST00000552590 PNRC1Q12796 327 aaPredicted RBP4.24□□□□□ -1.73
PRIM1-208ENST00000552590 MRPL52Q86TS9 123 aaKnown RBP4.24□□□□□ -1.73
PRIM1-208ENST00000552590 TCTE3Q8IZS6 198 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 GATD1Q8NB37 220 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
PRIM1-208ENST00000552590 ZNF727A8MUV8 499 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 MBP02144 154 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 PET100P0DJ07 73 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
PRIM1-208ENST00000552590 KIAA0087Q14695 138 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 CST9LP1Q5W188 147 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms