RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CLUHP3Q96NS8 147 aa7.8□□□□□ -1.16
TGFBR1-209ENST00000552516 DAZ3Q9NR90 486 aaKnown RBP7.8□□□□□ -1.16
TGFBR1-209ENST00000552516 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
TGFBR1-209ENST00000552516 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
TGFBR1-209ENST00000552516 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
TGFBR1-209ENST00000552516 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 INSL3P51460 131 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 COX6A2Q02221 97 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 TCL1BO95988 128 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 Q8N3U1 123 aa7.79□□□□□ -1.16
TGFBR1-209ENST00000552516 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 POM121L12Q8N7R1 296 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 TRBV27A0A0K0K1C4 114 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 COX7A2LO14548 114 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 IGHV4-30-4P0DP06 118 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 NANOS2P60321 138 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 GAGE12HA6NDE8 117 aa7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 MRPL23Q16540 153 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-209ENST00000552516 SIVA1O15304 175 aa7.77□□□□□ -1.16
TGFBR1-209ENST00000552516 NDUFA11Q86Y39 141 aa7.77□□□□□ -1.16
TGFBR1-209ENST00000552516 MXRA5Q9NR99 2828 aa7.77□□□□□ -1.16
TGFBR1-209ENST00000552516 GAGE2BQ13066 116 aa7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 C1orf43Q9BWL3 253 aa7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 ICOSQ9Y6W8 199 aa7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 ANAPC13Q9BS18 74 aa7.77□□□□□ -1.17
TGFBR1-209ENST00000552516 ANKRD29Q8N6D5 301 aa7.76□□□□□ -1.17
TGFBR1-209ENST00000552516 C15orf53Q8NAA6 179 aa7.76□□□□□ -1.17
TGFBR1-209ENST00000552516 M0R2N4 97 aa7.76□□□□□ -1.17
TGFBR1-209ENST00000552516 SPAG11BQ08648 103 aa7.76□□□□□ -1.17
TGFBR1-209ENST00000552516 RBX1P62877 108 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 REG3AQ06141 175 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 CNFNQ9BYD5 112 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 TRBV10-1A0A0K0K1A3 114 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 TMEM223A0PJW6 202 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
TGFBR1-209ENST00000552516 ZFHX3Q15911 3703 aa7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 A0A096LNI7 61 aa7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 C11orf45Q8TAV5 145 aa7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 CHCHD10Q8WYQ3 142 aaPredicted RBP7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 HAMPP81172 84 aa7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 DNAJC30Q96LL9 226 aa7.74□□□□□ -1.17
TGFBR1-209ENST00000552516 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 F8W1H4 67 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 IGLV4-69A0A075B6H9 119 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 A0A0J9YWU9 116 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 ADAMTSL4-AS1Q5T5F5 129 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 ZMAT4Q9H898 229 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 RNF152Q8N8N0 203 aa7.73□□□□□ -1.17
TGFBR1-209ENST00000552516 IGKV3D-7A0A0C4DH55 119 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 IGLV1-51P01701 117 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 SPATA3Q8NHX4 192 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 TAL2Q16559 108 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 LINC01620Q4KN68 170 aa7.72□□□□□ -1.17
TGFBR1-209ENST00000552516 TRIAP1O43715 76 aa7.71□□□□□ -1.17
TGFBR1-209ENST00000552516 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
TGFBR1-209ENST00000552516 G3V4G9 280 aa7.71□□□□□ -1.18
TGFBR1-209ENST00000552516 Q6ZTC4 211 aa7.71□□□□□ -1.18
TGFBR1-209ENST00000552516 HIGD1BQ9P298 99 aa7.71□□□□□ -1.18
TGFBR1-209ENST00000552516 CELA1Q9UNI1 258 aa7.71□□□□□ -1.18
TGFBR1-209ENST00000552516 ODF3Q96PU9 254 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 CRYBA4P53673 196 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 A8MTW9 85 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 LINC00242Q5T6M2 205 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 LINC00315P59091 139 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 C6orf223Q8N319 242 aa7.7□□□□□ -1.18
TGFBR1-209ENST00000552516 KIF25-AS1Q9Y6Z4 181 aa7.69□□□□□ -1.18
TGFBR1-209ENST00000552516 KPRPQ5T749 579 aaPredicted RBP7.69□□□□□ -1.18
TGFBR1-209ENST00000552516 C14orf132Q9NPU4 83 aa7.69□□□□□ -1.18
TGFBR1-209ENST00000552516 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 FOXI1Q12951 378 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 CCL18P55774 89 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 MIAQ16674 131 aa7.68□□□□□ -1.18
TGFBR1-209ENST00000552516 TRBV6-5A0A0K0K1A5 114 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 UBE2D1P51668 147 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 UBE2D3P61077 147 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 UBE2D2P62837 147 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 UBE2BP63146 152 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 CDC42SE2Q9NRR3 84 aa7.67□□□□□ -1.18
TGFBR1-209ENST00000552516 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
TGFBR1-209ENST00000552516 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
TGFBR1-209ENST00000552516 FHL2Q14192 279 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms