RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 SPANXA1Q9NS26 97 aa4.56□□□□□ -1.68
COX6A1-202ENST00000549525 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 A0A1B0GV90 55 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 E9PLD3 99 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 GAS8-AS1O95177 125 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 P0DMU3 169 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 FAM231AP0DMU4 169 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 FAM231CP0DMU5 169 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 NMUP48645 174 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 MAJINQ3KP22 176 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 BVES-AS1Q5T3Y7 98 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
COX6A1-202ENST00000549525 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 CST9LQ9H4G1 147 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 JPT2Q9H910 190 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 MRPL35Q9NZE8 188 aaKnown RBP4.55□□□□□ -1.68
COX6A1-202ENST00000549525 MUC4Q99102 2169 aa4.55□□□□□ -1.68
COX6A1-202ENST00000549525 A0A0J9YY99 117 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 H3BRM9 83 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 H7C423 109 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 FGF6P10767 208 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 HINT1P49773 126 aaPredicted RBP4.54□□□□□ -1.68
COX6A1-202ENST00000549525 MPV17L2Q567V2 206 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 LINC00469Q8N7U9 141 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 STPG4Q8N801 248 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 ATP6V0E2Q8NHE4 81 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
COX6A1-202ENST00000549525 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
COX6A1-202ENST00000549525 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
COX6A1-202ENST00000549525 TRAV8-6A0A0B4J262 113 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 K7EP13 123 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 ZNF25P17030 456 aaPredicted RBP4.53□□□□□ -1.68
COX6A1-202ENST00000549525 MRPS36P82909 103 aaKnown RBP4.53□□□□□ -1.68
COX6A1-202ENST00000549525 COTL1Q14019 142 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 CASC10Q5T4H9 136 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 ZNRF2Q8NHG8 242 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 GTSF1LQ9H1H1 148 aa4.53□□□□□ -1.68
COX6A1-202ENST00000549525 TRBV25-1A0A075B6N4 114 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 A0A096LPF7 62 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 TSHBP01222 138 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 GAGE4Q13068 117 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 GAGE5Q13069 117 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 UBE2V1Q13404 147 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 ZFAND6Q6FIF0 208 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 COPS9Q8WXC6 57 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 VSIG2Q96IQ7 327 aa4.52□□□□□ -1.69
COX6A1-202ENST00000549525 UBE2D3P61077 147 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 UBE2D2P62837 147 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 LELP1Q5T871 98 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 C2orf91Q6ZV80 131 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 Q6ZVH6 145 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 CEND1Q8N111 149 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 AMELXQ99217 191 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
COX6A1-202ENST00000549525 TRBV6-8A0A0A6YYG3 113 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 TINCRA0A1B0GVN0 87 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 UBE2L6O14933 153 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 LEPROTO15243 131 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 VAMP3Q15836 100 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 TMEM170BQ5T4T1 132 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 LYPD5Q6UWN5 251 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 PCP2Q8IVA1 136 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 HIST1H4GQ99525 98 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 CHCHD7Q9BUK0 85 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 CHAC1Q9BUX1 264 aa4.5□□□□□ -1.69
COX6A1-202ENST00000549525 NACAE9PAV3 2078 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 TAX1BP3O14907 124 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 CCL25O15444 150 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
COX6A1-202ENST00000549525 HERVK_113P63121 156 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
COX6A1-202ENST00000549525 CIRBPQ14011 172 aaKnown RBP4.49□□□□□ -1.69
COX6A1-202ENST00000549525 LYRM7Q5U5X0 104 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 OR5A1Q8NGJ0 315 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 UPK3BQ9BT76 320 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
COX6A1-202ENST00000549525 TP73-AS1Q9UF72 201 aa4.49□□□□□ -1.69
COX6A1-202ENST00000549525 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
COX6A1-202ENST00000549525 IGLV4-3A0A075B6K6 122 aa4.48□□□□□ -1.69
COX6A1-202ENST00000549525 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
COX6A1-202ENST00000549525 LOC100131303A0A0U1RQF7 123 aa4.48□□□□□ -1.69
COX6A1-202ENST00000549525 ZNF815PA8K554 130 aa4.48□□□□□ -1.69
COX6A1-202ENST00000549525 TMEM238C9JI98 176 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms