RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 UBE2BP63146 152 aa12□□□□□ -0.49
GATC-202ENST00000548171 GAGE2EQ4V326 116 aa12□□□□□ -0.49
GATC-202ENST00000548171 C10orf25Q5T742 122 aa12□□□□□ -0.49
GATC-202ENST00000548171 SMIM7Q9BQ49 75 aa12□□□□□ -0.49
GATC-202ENST00000548171 C20orf78Q9BR46 151 aa12□□□□□ -0.49
GATC-202ENST00000548171 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
GATC-202ENST00000548171 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
GATC-202ENST00000548171 M0QXV9 152 aa11.99□□□□□ -0.49
GATC-202ENST00000548171 BLOC1S1P78537 153 aa11.99□□□□□ -0.49
GATC-202ENST00000548171 UNQ6190/PRO20217Q6UXQ8 127 aa11.99□□□□□ -0.49
GATC-202ENST00000548171 KRTAP9-2Q9BYQ4 174 aa11.99□□□□□ -0.49
GATC-202ENST00000548171 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
GATC-202ENST00000548171 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
GATC-202ENST00000548171 RPL32P62910 135 aaKnown RBP11.98□□□□□ -0.49
GATC-202ENST00000548171 TCTE3Q8IZS6 198 aa11.98□□□□□ -0.49
GATC-202ENST00000548171 LINC00862A6NCI5 91 aa11.97□□□□□ -0.49
GATC-202ENST00000548171 RPL39P62891 51 aaKnown RBP11.97□□□□□ -0.49
GATC-202ENST00000548171 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
GATC-202ENST00000548171 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
GATC-202ENST00000548171 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
GATC-202ENST00000548171 FAM104AQ969W3 186 aa11.97□□□□□ -0.49
GATC-202ENST00000548171 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
GATC-202ENST00000548171 HBBP68871 147 aa11.96□□□□□ -0.49
GATC-202ENST00000548171 FAM104BQ5XKR9 115 aa11.96□□□□□ -0.49
GATC-202ENST00000548171 NAT8BQ9UHF3 227 aa11.96□□□□□ -0.49
GATC-202ENST00000548171 TGIF2-C20orf24A0A0A6YYL0 155 aa11.95□□□□□ -0.5
GATC-202ENST00000548171 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
GATC-202ENST00000548171 IFITM10A6NMD0 228 aa11.95□□□□□ -0.5
GATC-202ENST00000548171 ZNF727A8MUV8 499 aa11.95□□□□□ -0.5
GATC-202ENST00000548171 V9GYV3 84 aa11.95□□□□□ -0.5
GATC-202ENST00000548171 NDUFC2-KCTD14E9PQ53 114 aa11.93□□□□□ -0.5
GATC-202ENST00000548171 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
GATC-202ENST00000548171 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
GATC-202ENST00000548171 ZNF861PO60384 105 aa11.92□□□□□ -0.5
GATC-202ENST00000548171 CKS2P33552 79 aa11.92□□□□□ -0.5
GATC-202ENST00000548171 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
GATC-202ENST00000548171 A0A1B0GW15 77 aa11.91□□□□□ -0.5
GATC-202ENST00000548171 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
GATC-202ENST00000548171 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
GATC-202ENST00000548171 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
GATC-202ENST00000548171 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
GATC-202ENST00000548171 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
GATC-202ENST00000548171 NUPR1O60356 82 aa11.88□□□□□ -0.51
GATC-202ENST00000548171 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
GATC-202ENST00000548171 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
GATC-202ENST00000548171 C2orf82Q6UX34 121 aa11.87□□□□□ -0.51
GATC-202ENST00000548171 TSPAN13O95857 204 aa11.86□□□□□ -0.51
GATC-202ENST00000548171 SRP19P09132 144 aaKnown RBP11.86□□□□□ -0.51
GATC-202ENST00000548171 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
GATC-202ENST00000548171 SMIM27A0A1W2PRY6 76 aa11.85□□□□□ -0.51
GATC-202ENST00000548171 D6R8Y8 96 aa11.85□□□□□ -0.51
GATC-202ENST00000548171 LCE2AQ5TA79 106 aaPredicted RBP11.85□□□□□ -0.51
GATC-202ENST00000548171 LINC01561Q8N1V8 128 aa11.85□□□□□ -0.51
GATC-202ENST00000548171 PPBPP02775 128 aa11.84□□□□□ -0.51
GATC-202ENST00000548171 S100A8P05109 93 aa11.84□□□□□ -0.51
GATC-202ENST00000548171 F8W036 122 aa11.83□□□□□ -0.52
GATC-202ENST00000548171 NPYP01303 97 aa11.83□□□□□ -0.52
GATC-202ENST00000548171 RAB5AP20339 215 aa11.83□□□□□ -0.52
GATC-202ENST00000548171 LBHQ53QV2 105 aaPredicted RBP11.83□□□□□ -0.52
GATC-202ENST00000548171 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
GATC-202ENST00000548171 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
GATC-202ENST00000548171 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
GATC-202ENST00000548171 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
GATC-202ENST00000548171 CRYGAP11844 174 aa11.81□□□□□ -0.52
GATC-202ENST00000548171 PRSS2P07478 247 aa11.8□□□□□ -0.52
GATC-202ENST00000548171 RPL28P46779 137 aaKnown RBP11.8□□□□□ -0.52
GATC-202ENST00000548171 CKS1BP61024 79 aa11.8□□□□□ -0.52
GATC-202ENST00000548171 ADIRFQ15847 76 aa11.8□□□□□ -0.52
GATC-202ENST00000548171 TEX43Q6ZNM6 134 aa11.8□□□□□ -0.52
GATC-202ENST00000548171 CTDSP1Q9GZU7 261 aa11.8□□□□□ -0.52
GATC-202ENST00000548171 A0A087X002 238 aa11.79□□□□□ -0.52
GATC-202ENST00000548171 TYMSOSQ8TAI1 123 aa11.79□□□□□ -0.52
GATC-202ENST00000548171 C2orf88Q9BSF0 95 aa11.79□□□□□ -0.52
GATC-202ENST00000548171 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
GATC-202ENST00000548171 TP73-AS1Q9UF72 201 aa11.78□□□□□ -0.52
GATC-202ENST00000548171 NAT8Q9UHE5 227 aa11.78□□□□□ -0.52
GATC-202ENST00000548171 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.53
GATC-202ENST00000548171 Q6ZN92 141 aa11.77□□□□□ -0.53
GATC-202ENST00000548171 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 BCE1O60756 84 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 Q8IZM0 81 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 LINC00469Q8N7U9 141 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
GATC-202ENST00000548171 KRTAP9-6A0A140TA67 174 aa11.75□□□□□ -0.53
GATC-202ENST00000548171 MRPL55Q7Z7F7 128 aaKnown RBP11.75□□□□□ -0.53
GATC-202ENST00000548171 TOMM7Q9P0U1 55 aa11.75□□□□□ -0.53
GATC-202ENST00000548171 TMEM136Q6ZRR5 245 aa11.74□□□□□ -0.53
GATC-202ENST00000548171 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
GATC-202ENST00000548171 AKAP14Q86UN6 197 aa11.73□□□□□ -0.53
GATC-202ENST00000548171 ALKBH7Q9BT30 221 aaPredicted RBP11.73□□□□□ -0.53
GATC-202ENST00000548171 VCX2Q9H322 139 aa11.73□□□□□ -0.53
GATC-202ENST00000548171 PRSS47A8MTI9 375 aa11.72□□□□□ -0.53
GATC-202ENST00000548171 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
GATC-202ENST00000548171 AMELXQ99217 191 aa11.72□□□□□ -0.53
GATC-202ENST00000548171 NPSP0C0P6 89 aa11.71□□□□□ -0.53
GATC-202ENST00000548171 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.53
GATC-202ENST00000548171 LAMTOR2Q9Y2Q5 125 aa11.71□□□□□ -0.53
GATC-202ENST00000548171 F8VRH5 84 aa11.7□□□□□ -0.54
GATC-202ENST00000548171 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms