RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 TMEM141Q96I45 108 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 A0A087WYN8 130 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 NPSP0C0P6 89 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
DDX54-204ENST00000546898 OR10D4PQ8NGN7 298 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 PRSS3P2Q8NHM4 247 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
DDX54-204ENST00000546898 IGLV4-69A0A075B6H9 119 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 IGHV3OR16-9A0A0B4J2B5 98 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 MT-ND6P03923 174 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 G0S2P27469 103 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 RPL37AP61513 92 aaKnown RBP10.1□□□□□ -0.79
DDX54-204ENST00000546898 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
DDX54-204ENST00000546898 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
DDX54-204ENST00000546898 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
DDX54-204ENST00000546898 Q6ZN92 141 aa10.09□□□□□ -0.79
DDX54-204ENST00000546898 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
DDX54-204ENST00000546898 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
DDX54-204ENST00000546898 A0A096LNI7 61 aa10.08□□□□□ -0.8
DDX54-204ENST00000546898 TGIF2-C20orf24A0A0A6YYL0 155 aa10.08□□□□□ -0.8
DDX54-204ENST00000546898 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
DDX54-204ENST00000546898 C2orf88Q9BSF0 95 aa10.08□□□□□ -0.8
DDX54-204ENST00000546898 F8WDY8 70 aa10.07□□□□□ -0.8
DDX54-204ENST00000546898 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
DDX54-204ENST00000546898 MAJINQ3KP22 176 aa10.07□□□□□ -0.8
DDX54-204ENST00000546898 Q6ZRU5 148 aa10.07□□□□□ -0.8
DDX54-204ENST00000546898 ORAOV1Q8WV07 137 aa10.07□□□□□ -0.8
DDX54-204ENST00000546898 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
DDX54-204ENST00000546898 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
DDX54-204ENST00000546898 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
DDX54-204ENST00000546898 AMELXQ99217 191 aa10.06□□□□□ -0.8
DDX54-204ENST00000546898 TIMM17AQ99595 171 aa10.06□□□□□ -0.8
DDX54-204ENST00000546898 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
DDX54-204ENST00000546898 A0A087WZ39 114 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 IGIPA6NJ69 53 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 APOC3P02656 99 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 UBE2D1P51668 147 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 LINC00173Q6ZV60 143 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 SVBPQ8N300 66 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 STPG4Q8N801 248 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
DDX54-204ENST00000546898 VCX2Q9H322 139 aa10.05□□□□□ -0.8
DDX54-204ENST00000546898 SNAPINO95295 136 aa10.04□□□□□ -0.8
DDX54-204ENST00000546898 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
DDX54-204ENST00000546898 LINC01561Q8N1V8 128 aa10.04□□□□□ -0.8
DDX54-204ENST00000546898 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
DDX54-204ENST00000546898 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
DDX54-204ENST00000546898 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
DDX54-204ENST00000546898 PTTG1IPP53801 180 aa10.03□□□□□ -0.8
DDX54-204ENST00000546898 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
DDX54-204ENST00000546898 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
DDX54-204ENST00000546898 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
DDX54-204ENST00000546898 NDUFA1O15239 70 aa10.02□□□□□ -0.81
DDX54-204ENST00000546898 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
DDX54-204ENST00000546898 SEC11AP67812 179 aa10.01□□□□□ -0.81
DDX54-204ENST00000546898 ERASQ7Z444 233 aa10.01□□□□□ -0.81
DDX54-204ENST00000546898 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
DDX54-204ENST00000546898 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
DDX54-204ENST00000546898 GAGE2BQ13066 116 aa10□□□□□ -0.81
DDX54-204ENST00000546898 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
DDX54-204ENST00000546898 FA2HQ7L5A8 372 aa10□□□□□ -0.81
DDX54-204ENST00000546898 SMCO4Q9NRQ5 59 aa10□□□□□ -0.81
DDX54-204ENST00000546898 HERVK_113P63121 156 aa9.99□□□□□ -0.81
DDX54-204ENST00000546898 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
DDX54-204ENST00000546898 SCGB3A1Q96QR1 104 aa9.99□□□□□ -0.81
DDX54-204ENST00000546898 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
DDX54-204ENST00000546898 J3QL48 77 aa9.98□□□□□ -0.81
DDX54-204ENST00000546898 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
DDX54-204ENST00000546898 OXTP01178 125 aa9.97□□□□□ -0.81
DDX54-204ENST00000546898 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
DDX54-204ENST00000546898 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
DDX54-204ENST00000546898 A0A0J9YXV3 536 aa9.96□□□□□ -0.82
DDX54-204ENST00000546898 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
DDX54-204ENST00000546898 C10orf25Q5T742 122 aa9.96□□□□□ -0.82
DDX54-204ENST00000546898 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
DDX54-204ENST00000546898 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
DDX54-204ENST00000546898 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
DDX54-204ENST00000546898 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
DDX54-204ENST00000546898 PRSS2P07478 247 aa9.94□□□□□ -0.82
DDX54-204ENST00000546898 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
DDX54-204ENST00000546898 Q8IZM0 81 aa9.94□□□□□ -0.82
DDX54-204ENST00000546898 PACRGQ96M98 296 aaPredicted RBP9.94□□□□□ -0.82
DDX54-204ENST00000546898 CDKN2A-AS1Q9UH64 79 aa9.94□□□□□ -0.82
DDX54-204ENST00000546898 LRP1Q07954 4544 aaKnown RBP9.94□□□□□ -0.82
DDX54-204ENST00000546898 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
DDX54-204ENST00000546898 FAT3Q8TDW7 4589 aa9.93□□□□□ -0.82
DDX54-204ENST00000546898 A0A1W2PNN7 141 aa9.92□□□□□ -0.82
DDX54-204ENST00000546898 LINC00614P0C842 121 aa9.92□□□□□ -0.82
DDX54-204ENST00000546898 PMVKQ15126 192 aa9.92□□□□□ -0.82
DDX54-204ENST00000546898 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
DDX54-204ENST00000546898 Q6ZRP5 223 aa9.92□□□□□ -0.82
DDX54-204ENST00000546898 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms