RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 FOXI1Q12951 378 aa11.34□□□□□ -0.59
CADM1-220ENST00000546000 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
CADM1-220ENST00000546000 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
CADM1-220ENST00000546000 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
CADM1-220ENST00000546000 C5orf38Q86SI9 138 aa11.33□□□□□ -0.6
CADM1-220ENST00000546000 ATOH7Q8N100 152 aa11.33□□□□□ -0.6
CADM1-220ENST00000546000 LOC105371267A0A1B0GV96 52 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 K7EP13 123 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
CADM1-220ENST00000546000 AKR1D1P51857 326 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
CADM1-220ENST00000546000 FAM19A3Q7Z5A8 133 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 MAPKAPK5-AS1Q8N8E1 139 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
CADM1-220ENST00000546000 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
CADM1-220ENST00000546000 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
CADM1-220ENST00000546000 NFE4Q86UQ8 179 aa11.31□□□□□ -0.6
CADM1-220ENST00000546000 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
CADM1-220ENST00000546000 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
CADM1-220ENST00000546000 EPPK1P58107 5090 aaKnown RBP11.3□□□□□ -0.6
CADM1-220ENST00000546000 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 DPM2O94777 84 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 WFDC2Q14508 124 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 DNAH17Q9UFH2 4485 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 BIRC6Q9NR09 4857 aa11.3□□□□□ -0.6
CADM1-220ENST00000546000 C20orf202A1L168 122 aa11.29□□□□□ -0.6
CADM1-220ENST00000546000 LECT2O14960 151 aa11.29□□□□□ -0.6
CADM1-220ENST00000546000 IGKCP01834 107 aa11.29□□□□□ -0.6
CADM1-220ENST00000546000 RMI2Q96E14 147 aa11.29□□□□□ -0.6
CADM1-220ENST00000546000 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 HERVK_113P63121 156 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 CDPF1Q6NVV7 123 aa11.28□□□□□ -0.6
CADM1-220ENST00000546000 COX7A2LO14548 114 aa11.27□□□□□ -0.61
CADM1-220ENST00000546000 PLNP26678 52 aa11.27□□□□□ -0.61
CADM1-220ENST00000546000 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.61
CADM1-220ENST00000546000 SEC11AP67812 179 aa11.26□□□□□ -0.61
CADM1-220ENST00000546000 MAJINQ3KP22 176 aa11.26□□□□□ -0.61
CADM1-220ENST00000546000 PYY3Q5JQD4 70 aa11.26□□□□□ -0.61
CADM1-220ENST00000546000 A0A087WZ39 114 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 RTL8CO15255 209 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 PSCAO43653 123 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 C15orf56Q8N910 161 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
CADM1-220ENST00000546000 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
CADM1-220ENST00000546000 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
CADM1-220ENST00000546000 STPG4Q8N801 248 aa11.24□□□□□ -0.61
CADM1-220ENST00000546000 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
CADM1-220ENST00000546000 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
CADM1-220ENST00000546000 MALP21145 153 aa11.23□□□□□ -0.61
CADM1-220ENST00000546000 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
CADM1-220ENST00000546000 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
CADM1-220ENST00000546000 FAT2Q9NYQ8 4349 aa11.21□□□□□ -0.61
CADM1-220ENST00000546000 H3BRM9 83 aa11.21□□□□□ -0.61
CADM1-220ENST00000546000 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
CADM1-220ENST00000546000 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
CADM1-220ENST00000546000 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CADM1-220ENST00000546000 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
CADM1-220ENST00000546000 TNP2Q05952 138 aa11.2□□□□□ -0.62
CADM1-220ENST00000546000 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
CADM1-220ENST00000546000 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
CADM1-220ENST00000546000 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
CADM1-220ENST00000546000 DNAH11Q96DT5 4516 aa11.19□□□□□ -0.62
CADM1-220ENST00000546000 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
CADM1-220ENST00000546000 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
CADM1-220ENST00000546000 A0A087WTM6 91 aa11.17□□□□□ -0.62
CADM1-220ENST00000546000 FUSP35637 526 aaKnown RBP eCLIP11.17□□□□□ -0.62
CADM1-220ENST00000546000 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
CADM1-220ENST00000546000 HERVK_113P61574 105 aa11.16□□□□□ -0.62
CADM1-220ENST00000546000 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
CADM1-220ENST00000546000 COX7B2Q8TF08 81 aa11.16□□□□□ -0.62
CADM1-220ENST00000546000 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
CADM1-220ENST00000546000 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.62
CADM1-220ENST00000546000 APOMO95445 188 aa11.15□□□□□ -0.62
CADM1-220ENST00000546000 PAM16Q9Y3D7 125 aa11.15□□□□□ -0.62
CADM1-220ENST00000546000 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
CADM1-220ENST00000546000 E9PLD3 99 aa11.14□□□□□ -0.63
CADM1-220ENST00000546000 LEPROTO15243 131 aa11.14□□□□□ -0.63
CADM1-220ENST00000546000 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
CADM1-220ENST00000546000 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
CADM1-220ENST00000546000 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
CADM1-220ENST00000546000 SLPIP03973 132 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 PRSS2P07478 247 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 NMUP48645 174 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 C10orf25Q5T742 122 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 Q8IZM0 81 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
CADM1-220ENST00000546000 VAMP8Q9BV40 100 aa11.12□□□□□ -0.63
CADM1-220ENST00000546000 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
CADM1-220ENST00000546000 J3QQQ9 107 aa11.11□□□□□ -0.63
CADM1-220ENST00000546000 SPATA45Q537H7 98 aa11.11□□□□□ -0.63
CADM1-220ENST00000546000 Q8N814 137 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms