RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.41
SDR39U1-203ENST00000544691 LINC00526Q96FQ7 95 aa12.52□□□□□ -0.41
SDR39U1-203ENST00000544691 C2orf88Q9BSF0 95 aa12.52□□□□□ -0.41
SDR39U1-203ENST00000544691 HSPG2P98160 4391 aa12.51□□□□□ -0.41
SDR39U1-203ENST00000544691 IGHV1-58A0A0C4DH39 117 aa12.51□□□□□ -0.41
SDR39U1-203ENST00000544691 HAMPP81172 84 aa12.51□□□□□ -0.41
SDR39U1-203ENST00000544691 MALP21145 153 aa12.5□□□□□ -0.41
SDR39U1-203ENST00000544691 XGP55808 180 aa12.5□□□□□ -0.41
SDR39U1-203ENST00000544691 COX6A2Q02221 97 aa12.5□□□□□ -0.41
SDR39U1-203ENST00000544691 RAB5BP61020 215 aa12.49□□□□□ -0.41
SDR39U1-203ENST00000544691 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
SDR39U1-203ENST00000544691 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
SDR39U1-203ENST00000544691 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
SDR39U1-203ENST00000544691 Q6ZSA8 131 aa12.47□□□□□ -0.41
SDR39U1-203ENST00000544691 KRTAP17-1Q9BYP8 105 aa12.47□□□□□ -0.41
SDR39U1-203ENST00000544691 HBDP02042 147 aa12.47□□□□□ -0.41
SDR39U1-203ENST00000544691 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.46□□□□□ -0.42
SDR39U1-203ENST00000544691 RYR1P21817 5038 aa12.45□□□□□ -0.42
SDR39U1-203ENST00000544691 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
SDR39U1-203ENST00000544691 IGLV4-69A0A075B6H9 119 aa12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 A0A087WZ39 114 aa12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 FAM19A3Q7Z5A8 133 aa12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 HERC2O95714 4834 aa12.44□□□□□ -0.42
SDR39U1-203ENST00000544691 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 APOMO95445 188 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 PDZD11Q5EBL8 140 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 DNAH8Q96JB1 4490 aa12.43□□□□□ -0.42
SDR39U1-203ENST00000544691 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 LINC00310P59036 64 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 SPAG11BQ08648 103 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 ORAOV1Q8WV07 137 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 PMVKQ15126 192 aa12.42□□□□□ -0.42
SDR39U1-203ENST00000544691 FAM19A2Q8N3H0 131 aa12.41□□□□□ -0.42
SDR39U1-203ENST00000544691 OR10D4PQ8NGN7 298 aa12.41□□□□□ -0.42
SDR39U1-203ENST00000544691 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
SDR39U1-203ENST00000544691 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
SDR39U1-203ENST00000544691 PANO1I0J062 215 aa12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 SERF1AO75920 110 aa12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 HERVK_113P63121 156 aa12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 SYCNQ0VAF6 134 aa12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 GEMIN7Q9H840 131 aaKnown RBP12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.4□□□□□ -0.42
SDR39U1-203ENST00000544691 HSBP1O75506 76 aa12.39□□□□□ -0.43
SDR39U1-203ENST00000544691 SEC11AP67812 179 aa12.39□□□□□ -0.43
SDR39U1-203ENST00000544691 SCXQ7RTU7 201 aa12.39□□□□□ -0.43
SDR39U1-203ENST00000544691 NDUFA6P56556 154 aa12.38□□□□□ -0.43
SDR39U1-203ENST00000544691 Q6ZRU5 148 aa12.38□□□□□ -0.43
SDR39U1-203ENST00000544691 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
SDR39U1-203ENST00000544691 CHAC1Q9BUX1 264 aa12.38□□□□□ -0.43
SDR39U1-203ENST00000544691 TINCRA0A1B0GVN0 87 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 NUPR1O60356 82 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 ATP5LO75964 103 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 SMR3BP02814 79 aaPredicted RBP12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 S100A1P23297 94 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 C2orf48Q96LS8 159 aa12.37□□□□□ -0.43
SDR39U1-203ENST00000544691 KIAA0087Q14695 138 aa12.36□□□□□ -0.43
SDR39U1-203ENST00000544691 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
SDR39U1-203ENST00000544691 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 Q8N1X5 172 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 KRTAP4-5Q9BYR2 181 aa12.35□□□□□ -0.43
SDR39U1-203ENST00000544691 IGLV5-45A0A087WSX0 123 aa12.34□□□□□ -0.43
SDR39U1-203ENST00000544691 C10orf25Q5T742 122 aa12.33□□□□□ -0.44
SDR39U1-203ENST00000544691 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
SDR39U1-203ENST00000544691 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
SDR39U1-203ENST00000544691 A0A096LNI7 61 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 IGLC3P0DOY3 106 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 CIRBPQ14011 172 aaKnown RBP12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 FAT1Q14517 4588 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 SMIM1B2RUZ4 78 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 NDUFA1O15239 70 aa12.32□□□□□ -0.44
SDR39U1-203ENST00000544691 SPACA4Q8TDM5 124 aa12.31□□□□□ -0.44
SDR39U1-203ENST00000544691 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
SDR39U1-203ENST00000544691 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
SDR39U1-203ENST00000544691 LEPROTL1O95214 131 aa12.29□□□□□ -0.44
SDR39U1-203ENST00000544691 Q8IZM0 81 aa12.29□□□□□ -0.44
SDR39U1-203ENST00000544691 C6orf48Q9UBA6 75 aa12.29□□□□□ -0.44
SDR39U1-203ENST00000544691 F8WDY8 70 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms