RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 LEPROTO15243 131 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 MAST4O15021 2626 aa11.29□□□□□ -0.6
SNRNP70-203ENST00000544278 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
SNRNP70-203ENST00000544278 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
SNRNP70-203ENST00000544278 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
SNRNP70-203ENST00000544278 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
SNRNP70-203ENST00000544278 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
SNRNP70-203ENST00000544278 J3QKU1 62 aa11.27□□□□□ -0.61
SNRNP70-203ENST00000544278 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
SNRNP70-203ENST00000544278 F8WDY8 70 aa11.26□□□□□ -0.61
SNRNP70-203ENST00000544278 RS1O15537 224 aa11.26□□□□□ -0.61
SNRNP70-203ENST00000544278 A8MTW9 85 aa11.25□□□□□ -0.61
SNRNP70-203ENST00000544278 FBN1P35555 2871 aaKnown RBP11.25□□□□□ -0.61
SNRNP70-203ENST00000544278 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
SNRNP70-203ENST00000544278 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
SNRNP70-203ENST00000544278 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
SNRNP70-203ENST00000544278 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
SNRNP70-203ENST00000544278 TOMM7Q9P0U1 55 aa11.24□□□□□ -0.61
SNRNP70-203ENST00000544278 TRGV4A0A0C4DH28 118 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 RPL36AP83881 106 aaKnown RBP11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 RPL36ALQ969Q0 106 aaKnown RBP11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 K7EQD1 137 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 Q9H8V8 135 aa11.22□□□□□ -0.61
SNRNP70-203ENST00000544278 C2orf82Q6UX34 121 aa11.21□□□□□ -0.62
SNRNP70-203ENST00000544278 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 LINC00242Q5T6M2 205 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 TMEM263Q8WUH6 116 aaKnown RBP11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 LY6G6DO95868 133 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 LITAFQ99732 161 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 C19orf73Q9NVV2 129 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 RNASE1P07998 156 aaKnown RBP11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 CLEC2BQ92478 149 aa11.2□□□□□ -0.62
SNRNP70-203ENST00000544278 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
SNRNP70-203ENST00000544278 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 FAM236AA0A1B0GUQ0 79 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 FAM236BA0A1B0GV22 79 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 SBSPONQ8IVN8 264 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
SNRNP70-203ENST00000544278 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
SNRNP70-203ENST00000544278 UBE2L6O14933 153 aa11.17□□□□□ -0.62
SNRNP70-203ENST00000544278 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
SNRNP70-203ENST00000544278 TRIAP1O43715 76 aa11.16□□□□□ -0.62
SNRNP70-203ENST00000544278 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
SNRNP70-203ENST00000544278 Q8N3U1 123 aa11.16□□□□□ -0.62
SNRNP70-203ENST00000544278 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
SNRNP70-203ENST00000544278 HILS1P60008 231 aa11.15□□□□□ -0.62
SNRNP70-203ENST00000544278 C5orf47Q569G3 176 aa11.15□□□□□ -0.62
SNRNP70-203ENST00000544278 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
SNRNP70-203ENST00000544278 ATXN8Q156A1 80 aa11.15□□□□□ -0.62
SNRNP70-203ENST00000544278 C9orf153Q5TBE3 101 aa11.14□□□□□ -0.63
SNRNP70-203ENST00000544278 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
SNRNP70-203ENST00000544278 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
SNRNP70-203ENST00000544278 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
SNRNP70-203ENST00000544278 HTN3P15516 51 aa11.13□□□□□ -0.63
SNRNP70-203ENST00000544278 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
SNRNP70-203ENST00000544278 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
SNRNP70-203ENST00000544278 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
SNRNP70-203ENST00000544278 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
SNRNP70-203ENST00000544278 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
SNRNP70-203ENST00000544278 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
SNRNP70-203ENST00000544278 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
SNRNP70-203ENST00000544278 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
SNRNP70-203ENST00000544278 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
SNRNP70-203ENST00000544278 EDA2RQ9HAV5 297 aa11.11□□□□□ -0.63
SNRNP70-203ENST00000544278 MIAQ16674 131 aa11.11□□□□□ -0.63
SNRNP70-203ENST00000544278 H7C423 109 aa11.1□□□□□ -0.63
SNRNP70-203ENST00000544278 FHL2Q14192 279 aa11.1□□□□□ -0.63
SNRNP70-203ENST00000544278 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
SNRNP70-203ENST00000544278 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
SNRNP70-203ENST00000544278 PFN2P35080 140 aa11.09□□□□□ -0.63
SNRNP70-203ENST00000544278 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
SNRNP70-203ENST00000544278 GYPEP15421 78 aa11.09□□□□□ -0.63
SNRNP70-203ENST00000544278 XCL1P47992 114 aa11.08□□□□□ -0.64
SNRNP70-203ENST00000544278 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
SNRNP70-203ENST00000544278 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
SNRNP70-203ENST00000544278 DAZ4Q86SG3 579 aaKnown RBP11.07□□□□□ -0.64
SNRNP70-203ENST00000544278 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
SNRNP70-203ENST00000544278 DAZ3Q9NR90 486 aaKnown RBP11.07□□□□□ -0.64
SNRNP70-203ENST00000544278 HERVK_113P63121 156 aa11.07□□□□□ -0.64
SNRNP70-203ENST00000544278 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
SNRNP70-203ENST00000544278 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
SNRNP70-203ENST00000544278 A0A0B4J2C4 111 aa11.06□□□□□ -0.64
SNRNP70-203ENST00000544278 FAM222AQ5U5X8 452 aa11.06□□□□□ -0.64
SNRNP70-203ENST00000544278 Q6Q795 121 aa11.05□□□□□ -0.64
SNRNP70-203ENST00000544278 TRBV10-1A0A0K0K1A3 114 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms