RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 PDE6DO43924 150 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 GNG4P50150 75 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 CACNG7P62955 275 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 LINC00269Q8N2A0 174 aa5.06□□□□□ -1.6
MRPS35-204ENST00000542199 IGHV1-24A0A0C4DH33 117 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 XKRY2A2RUG3 117 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 F2Z2F3 143 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 TEX46H3BTG2 121 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 H7C1H1 209 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 IFNA1P01562 189 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 P01737 135 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 BCL2P10415 239 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 C9orf62Q8N4C0 152 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 DEFB104AQ8WTQ1 72 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 CNFNQ9BYD5 112 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 MED9Q9NWA0 146 aa5.05□□□□□ -1.6
MRPS35-204ENST00000542199 HLA-DQA1P01909 254 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 MGPP08493 103 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 CTRLP40313 264 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 RASL11AQ6T310 242 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 CLPSL2Q6UWE3 100 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 LYZL1Q6UWQ5 148 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 DPH3P1Q9H4G8 78 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 BIN3Q9NQY0 253 aa5.04□□□□□ -1.6
MRPS35-204ENST00000542199 K7EN84 100 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 NTF3P20783 257 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 NKX2-5P52952 324 aaPredicted RBP5.03□□□□□ -1.6
MRPS35-204ENST00000542199 REG3AQ06141 175 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 C9orf163Q8N9P6 203 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 NIT2Q9NQR4 276 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
MRPS35-204ENST00000542199 IGLV4-60A0A075B6I1 120 aa5.02□□□□□ -1.61
MRPS35-204ENST00000542199 TRAV8-4A0A0B4J246 113 aa5.02□□□□□ -1.61
MRPS35-204ENST00000542199 CNBPP62633 177 aaKnown RBP5.02□□□□□ -1.61
MRPS35-204ENST00000542199 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
MRPS35-204ENST00000542199 TMEM243Q9BU79 118 aa5.02□□□□□ -1.61
MRPS35-204ENST00000542199 RPP21Q9H633 154 aaKnown RBP5.02□□□□□ -1.61
MRPS35-204ENST00000542199 LRP2P98164 4655 aa5.02□□□□□ -1.61
MRPS35-204ENST00000542199 IGLV10-54A0A075B6I4 117 aa5.01□□□□□ -1.61
MRPS35-204ENST00000542199 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
MRPS35-204ENST00000542199 GATD1Q8NB37 220 aa5.01□□□□□ -1.61
MRPS35-204ENST00000542199 RNASE7Q9H1E1 156 aaKnown RBP5.01□□□□□ -1.61
MRPS35-204ENST00000542199 TRAV26-2A0A0B4J265 109 aa5□□□□□ -1.61
MRPS35-204ENST00000542199 TMEM250H0YL14 139 aa5□□□□□ -1.61
MRPS35-204ENST00000542199 OXTP01178 125 aa5□□□□□ -1.61
MRPS35-204ENST00000542199 COTL1Q14019 142 aa5□□□□□ -1.61
MRPS35-204ENST00000542199 LYPD6BQ8NI32 183 aa5□□□□□ -1.61
MRPS35-204ENST00000542199 UBE2L6O14933 153 aa4.99□□□□□ -1.61
MRPS35-204ENST00000542199 FOXA3P55318 350 aaPredicted RBP4.99□□□□□ -1.61
MRPS35-204ENST00000542199 RPL37AP61513 92 aaKnown RBP4.99□□□□□ -1.61
MRPS35-204ENST00000542199 FAM231DQ6ZW35 169 aa4.99□□□□□ -1.61
MRPS35-204ENST00000542199 NCR2O95944 276 aa4.98□□□□□ -1.61
MRPS35-204ENST00000542199 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
MRPS35-204ENST00000542199 TEX261Q6UWH6 196 aa4.98□□□□□ -1.61
MRPS35-204ENST00000542199 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
MRPS35-204ENST00000542199 C15orf56Q8N910 161 aa4.98□□□□□ -1.61
MRPS35-204ENST00000542199 RPL39LQ96EH5 51 aaKnown RBP4.98□□□□□ -1.61
MRPS35-204ENST00000542199 IGHV3-64A0A075B6Q5 118 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
MRPS35-204ENST00000542199 TRBV6-5A0A0K0K1A5 114 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 SDHAF1A6NFY7 115 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 A8MWL6 223 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 GATCO43716 136 aaKnown RBP4.97□□□□□ -1.61
MRPS35-204ENST00000542199 SMIM15Q7Z3B0 74 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 AKAP14Q86UN6 197 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
MRPS35-204ENST00000542199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.96□□□□□ -1.62
MRPS35-204ENST00000542199 IGKV2-29A2NJV5 120 aaPredicted RBP4.96□□□□□ -1.62
MRPS35-204ENST00000542199 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
MRPS35-204ENST00000542199 NDUFS6O75380 124 aaKnown RBP4.96□□□□□ -1.62
MRPS35-204ENST00000542199 APCSP02743 223 aa4.96□□□□□ -1.62
MRPS35-204ENST00000542199 FGF6P10767 208 aa4.96□□□□□ -1.62
MRPS35-204ENST00000542199 RNASEKQ6P5S7 137 aaKnown RBP4.96□□□□□ -1.62
MRPS35-204ENST00000542199 RNF185Q96GF1 192 aa4.96□□□□□ -1.62
MRPS35-204ENST00000542199 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
MRPS35-204ENST00000542199 IGKV3OR2-268A0A0C4DH90 116 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 I3L3M4 83 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 ESDP10768 282 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 ZNF25P17030 456 aaPredicted RBP4.95□□□□□ -1.62
MRPS35-204ENST00000542199 AMMECR1LQ6DCA0 310 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 LINC01551Q86U37 167 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 TSKUQ8WUA8 353 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 FAM210AQ96ND0 272 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
MRPS35-204ENST00000542199 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 HIGD1CA8MV81 97 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 RPS10P46783 165 aaKnown RBP4.94□□□□□ -1.62
MRPS35-204ENST00000542199 CEBPGP53567 150 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 POLR2KP53803 58 aaKnown RBP4.94□□□□□ -1.62
MRPS35-204ENST00000542199 OR5A1Q8NGJ0 315 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 SMIM7Q9BQ49 75 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 TMEM191AQ9H0A3 160 aa4.94□□□□□ -1.62
MRPS35-204ENST00000542199 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 RAB4AP20338 218 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 PMCHP20382 165 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms