RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NMSQ5H8A3 153 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 CYP2G1PQ6ZSU1 146 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 RPS27LQ71UM5 84 aaKnown RBP2.34□□□□□ -2.03
SNHG1-217ENST00000541578 SPATA12Q7Z6I5 190 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 BAGE3Q86Y29 109 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 BAGE2Q86Y30 109 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 PRR15Q8IV56 129 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 SLC22A24Q8N4F4 322 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 RPS4Y2Q8TD47 263 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 MYOZ3Q8TDC0 251 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 LSM10Q969L4 123 aaKnown RBP2.34□□□□□ -2.03
SNHG1-217ENST00000541578 CARD19Q96LW7 228 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 TRAV12-2A0A075B6T6 113 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TRAV1-2A0A0B4J238 106 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TRAV13-1A0A0B4J241 112 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TRAV4A0A0B4J268 109 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TRBV7-7A0A0K0K1E9 115 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 LCE6AA0A183 80 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 A0A1B0GU33 70 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 FAM24AA6NFZ4 105 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 KNCNA6PVL3 124 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 OOSP1A8MZH6 123 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 ZNF736B4DX44 427 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-217ENST00000541578 SSSCA1O60232 199 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 NUPR1O60356 82 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 PRH1P02810 166 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 COX8AP10176 69 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 HRES1P13985 223 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 COX7CP15954 63 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 CBLN1P23435 193 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 ZNF117Q03924 483 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 RTL8BQ17RB0 113 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 DEFB112Q30KQ8 113 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TEN1Q86WV5 123 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 NDUFA11Q86Y39 141 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 LYPD6Q86Y78 171 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 MSRB3Q8IXL7 192 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 DEFB108BQ8NET1 73 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 BORCS8Q96FH0 119 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 NMNAT3Q96T66 252 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 AGPAT4-IT1Q9H0P7 198 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
SNHG1-217ENST00000541578 IGLV3-9A0A075B6K5 115 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 C17orf51A8MQB3 221 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 NDUFB2O95178 105 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 RBP4P02753 201 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 CD3DP04234 171 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-217ENST00000541578 CAV3P56539 151 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 UBE2G1P62253 170 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
SNHG1-217ENST00000541578 QRFPP83859 136 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 CDK5R1Q15078 307 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 LINC01545Q5VT33 79 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 RPL7L1Q6DKI1 246 aaKnown RBP2.32□□□□□ -2.04
SNHG1-217ENST00000541578 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 Q8NAQ8 132 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 OR8B3Q8NGG8 313 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 CMC2Q9NRP2 79 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 SERP1Q9Y6X1 66 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 TENM2Q9NT68 2774 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 SORL1Q92673 2214 aa2.32□□□□□ -2.04
SNHG1-217ENST00000541578 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 A8MWV9 139 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 C9JCJ5 164 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 K7EIL1 84 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 HMGN2P05204 90 aaKnown RBP2.31□□□□□ -2.04
SNHG1-217ENST00000541578 GYPBP06028 91 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 CCL1P22362 96 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 FXYD7P58549 80 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 RPL30P62888 115 aaKnown RBP2.31□□□□□ -2.04
SNHG1-217ENST00000541578 CFAP126Q5VTH2 177 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 TRAPPC6BQ86SZ2 158 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 SBSPONQ8IVN8 264 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 LINC00311Q8N616 119 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 OR5C1Q8NGR4 320 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 FAM213BQ8TBF2 198 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 GPX7Q96SL4 187 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-217ENST00000541578 C11orf1Q9H5F2 150 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 SLC39A9Q9NUM3 307 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 HIGD1BQ9P298 99 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 AMMECR1Q9Y4X0 333 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-217ENST00000541578 LYSTQ99698 3801 aa2.31□□□□□ -2.04
SNHG1-217ENST00000541578 RBAKDNA6NC62 111 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 ATOX1O00244 68 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-217ENST00000541578 CST7O76096 145 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 RNASE2P10153 161 aaKnown RBP2.3□□□□□ -2.04
SNHG1-217ENST00000541578 HLA-DRB4P13762 266 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 INSL3P51460 131 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 NPC2P61916 151 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms