RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 COX19Q49B96 90 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
YBX3-211ENST00000541351 PRNTQ86SH4 94 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 NUDT10Q8NFP7 164 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 SMIM12Q96EX1 92 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 RPP21Q9H633 154 aaKnown RBP5.56□□□□□ -1.52
YBX3-211ENST00000541351 PSG8Q9UQ74 426 aa5.56□□□□□ -1.52
YBX3-211ENST00000541351 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 CTXND1A0A1B0GTU2 59 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 F5H697 171 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 CCL25O15444 150 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 CTRLP40313 264 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 PQLC2Q6ZP29 291 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 C5orf17Q8NAS9 161 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
YBX3-211ENST00000541351 RETNLBQ9BQ08 111 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
YBX3-211ENST00000541351 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
YBX3-211ENST00000541351 PDE6DO43924 150 aa5.54□□□□□ -1.52
YBX3-211ENST00000541351 BATFQ16520 125 aa5.54□□□□□ -1.52
YBX3-211ENST00000541351 SGK494Q96LW2 274 aa5.54□□□□□ -1.52
YBX3-211ENST00000541351 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
YBX3-211ENST00000541351 K7ERU9 68 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 APOMO95445 188 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 TCRAP04437 139 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 SMIM17P0DL12 118 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
YBX3-211ENST00000541351 ZNF726P1Q15940 193 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 PMCHL1Q16048 86 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 CST9LP1Q5W188 147 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 PAM16Q9Y3D7 125 aa5.53□□□□□ -1.52
YBX3-211ENST00000541351 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 CAMPP49913 170 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 UBE2BP63146 152 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 GNG5P63218 68 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 Q6ZN92 141 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
YBX3-211ENST00000541351 WDR61Q9GZS3 305 aaKnown RBP5.52□□□□□ -1.53
YBX3-211ENST00000541351 AMMECR1LQ6DCA0 310 aa5.51□□□□□ -1.53
YBX3-211ENST00000541351 BAGE3Q86Y29 109 aa5.51□□□□□ -1.53
YBX3-211ENST00000541351 BAGE2Q86Y30 109 aa5.51□□□□□ -1.53
YBX3-211ENST00000541351 A0A1W2PPV4 95 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 ZNF861PO60384 105 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 SERF1AO75920 110 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
YBX3-211ENST00000541351 RNF151Q2KHN1 245 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 OCIAD2Q56VL3 154 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 NUDT11Q96G61 164 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 PGLYRP4Q96LB8 373 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 GNB1LQ9BYB4 327 aa5.5□□□□□ -1.53
YBX3-211ENST00000541351 NUPR1O60356 82 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 TSHBP01222 138 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 LINC00310P59036 64 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 FOXI1Q12951 378 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
YBX3-211ENST00000541351 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 MRPL18Q9H0U6 180 aaKnown RBP5.49□□□□□ -1.53
YBX3-211ENST00000541351 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
YBX3-211ENST00000541351 GRIFINA4D1Z8 144 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 M0R2T5 61 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 XCL1P47992 114 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 KRTDAPP60985 99 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 VAMP3Q15836 100 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 LINC00526Q96FQ7 95 aa5.48□□□□□ -1.53
YBX3-211ENST00000541351 SSBP4Q9BWG4 385 aaPredicted RBP5.48□□□□□ -1.53
YBX3-211ENST00000541351 C19orf71A6NCJ1 209 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 PAGE4O60829 102 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 MALP21145 153 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
YBX3-211ENST00000541351 MT1HP80294 61 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 NUP35Q8NFH5 326 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 BORCS7Q96B45 105 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 AP1S3Q96PC3 154 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 EPDR1Q9UM22 224 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 ARL2-SNX15V9GYD0 113 aa5.47□□□□□ -1.53
YBX3-211ENST00000541351 A0A087X002 238 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 CDC34P49427 236 aaPredicted RBP5.46□□□□□ -1.54
YBX3-211ENST00000541351 HINT1P49773 126 aaPredicted RBP5.46□□□□□ -1.54
YBX3-211ENST00000541351 SS18Q15532 418 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 RASL11AQ6T310 242 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 OR5A1Q8NGJ0 315 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
YBX3-211ENST00000541351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.45□□□□□ -1.54
YBX3-211ENST00000541351 H7C423 109 aa5.45□□□□□ -1.54
YBX3-211ENST00000541351 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
YBX3-211ENST00000541351 MRPL54Q6P161 138 aaKnown RBP5.45□□□□□ -1.54
YBX3-211ENST00000541351 RNASEKQ6P5S7 137 aaKnown RBP5.45□□□□□ -1.54
YBX3-211ENST00000541351 C11orf52Q96A22 123 aa5.45□□□□□ -1.54
YBX3-211ENST00000541351 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
YBX3-211ENST00000541351 M0QXV9 152 aa5.44□□□□□ -1.54
YBX3-211ENST00000541351 TAX1BP3O14907 124 aa5.44□□□□□ -1.54
YBX3-211ENST00000541351 SH2D1AO60880 128 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms