RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
UBE3B-211ENST00000539843 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
UBE3B-211ENST00000539843 IFITM10A6NMD0 228 aa9.49□□□□□ -0.89
UBE3B-211ENST00000539843 D6R8Y8 96 aa9.49□□□□□ -0.89
UBE3B-211ENST00000539843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-211ENST00000539843 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-211ENST00000539843 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-211ENST00000539843 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
UBE3B-211ENST00000539843 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
UBE3B-211ENST00000539843 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
UBE3B-211ENST00000539843 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
UBE3B-211ENST00000539843 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-211ENST00000539843 UBR4Q5T4S7 5183 aa9.47□□□□□ -0.89
UBE3B-211ENST00000539843 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
UBE3B-211ENST00000539843 SRSF9Q13242 221 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBE3B-211ENST00000539843 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
UBE3B-211ENST00000539843 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
UBE3B-211ENST00000539843 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
UBE3B-211ENST00000539843 IGHV3OR16-9A0A0B4J2B5 98 aa9.44□□□□□ -0.9
UBE3B-211ENST00000539843 NPYP01303 97 aa9.44□□□□□ -0.9
UBE3B-211ENST00000539843 TMEM136Q6ZRR5 245 aa9.44□□□□□ -0.9
UBE3B-211ENST00000539843 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
UBE3B-211ENST00000539843 A0A1B0GXF2 115 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 C9JQL5 133 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 Q6ZN92 141 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
UBE3B-211ENST00000539843 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
UBE3B-211ENST00000539843 A0A087WZ39 114 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
UBE3B-211ENST00000539843 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
UBE3B-211ENST00000539843 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 DIRC1Q969H9 104 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 TMEM141Q96I45 108 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
UBE3B-211ENST00000539843 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
UBE3B-211ENST00000539843 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
UBE3B-211ENST00000539843 GAGE2EQ4V326 116 aa9.41□□□□□ -0.9
UBE3B-211ENST00000539843 GAGE2DQ9UEU5 116 aa9.41□□□□□ -0.9
UBE3B-211ENST00000539843 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
UBE3B-211ENST00000539843 UBE2BP63146 152 aa9.4□□□□□ -0.9
UBE3B-211ENST00000539843 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
UBE3B-211ENST00000539843 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
UBE3B-211ENST00000539843 TNXBP22105 4242 aa9.39□□□□□ -0.91
UBE3B-211ENST00000539843 PRSS2P07478 247 aa9.39□□□□□ -0.91
UBE3B-211ENST00000539843 PNRC1Q12796 327 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-211ENST00000539843 ODF1Q14990 250 aa9.39□□□□□ -0.91
UBE3B-211ENST00000539843 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
UBE3B-211ENST00000539843 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 C6orf48Q9UBA6 75 aa9.38□□□□□ -0.91
UBE3B-211ENST00000539843 IGLV4-3A0A075B6K6 122 aa9.37□□□□□ -0.91
UBE3B-211ENST00000539843 G0S2P27469 103 aa9.37□□□□□ -0.91
UBE3B-211ENST00000539843 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
UBE3B-211ENST00000539843 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
UBE3B-211ENST00000539843 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
UBE3B-211ENST00000539843 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 K7EMI3 77 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 M0QXV9 152 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 CKS1BP61024 79 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 RAB14P61106 215 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 VCX2Q9H322 139 aa9.36□□□□□ -0.91
UBE3B-211ENST00000539843 PRSS47A8MTI9 375 aa9.35□□□□□ -0.91
UBE3B-211ENST00000539843 NPSP0C0P6 89 aa9.35□□□□□ -0.91
UBE3B-211ENST00000539843 SEC11AP67812 179 aa9.35□□□□□ -0.91
UBE3B-211ENST00000539843 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
UBE3B-211ENST00000539843 Q8N8P6 123 aa9.35□□□□□ -0.91
UBE3B-211ENST00000539843 A0A1B0GVG6 124 aa9.34□□□□□ -0.91
UBE3B-211ENST00000539843 FAM168BA1KXE4 195 aa9.34□□□□□ -0.91
UBE3B-211ENST00000539843 H0Y9J4 135 aa9.34□□□□□ -0.91
UBE3B-211ENST00000539843 UBE2D1P51668 147 aa9.34□□□□□ -0.91
UBE3B-211ENST00000539843 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
UBE3B-211ENST00000539843 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
UBE3B-211ENST00000539843 C6orf226Q5I0X4 101 aa9.33□□□□□ -0.92
UBE3B-211ENST00000539843 NXT2Q9NPJ8 142 aaKnown RBP9.33□□□□□ -0.92
UBE3B-211ENST00000539843 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
UBE3B-211ENST00000539843 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
UBE3B-211ENST00000539843 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
UBE3B-211ENST00000539843 HERVK_113P63121 156 aa9.31□□□□□ -0.92
UBE3B-211ENST00000539843 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
UBE3B-211ENST00000539843 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
UBE3B-211ENST00000539843 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-211ENST00000539843 Q8IZM0 81 aa9.3□□□□□ -0.92
UBE3B-211ENST00000539843 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
UBE3B-211ENST00000539843 ALKBH7Q9BT30 221 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-211ENST00000539843 CXCL5P42830 114 aa9.29□□□□□ -0.92
UBE3B-211ENST00000539843 AMELXQ99217 191 aa9.29□□□□□ -0.92
UBE3B-211ENST00000539843 LRP2P98164 4655 aa9.29□□□□□ -0.92
UBE3B-211ENST00000539843 NUPR1O60356 82 aa9.27□□□□□ -0.93
UBE3B-211ENST00000539843 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
UBE3B-211ENST00000539843 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
UBE3B-211ENST00000539843 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
UBE3B-211ENST00000539843 F8VRH5 84 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms