RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 Q6ZTC4 211 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LRRK2Q5S007 2527 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 B4DSR2 109 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 CLEC19AQ6UXS0 136 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 SMAD5-AS1Q9Y6J3 95 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 NBPF19A0A087WUL8 3843 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 DSCR9P59020 149 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 Q6ZVQ6 151 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 RPL39LQ96EH5 51 aaKnown RBP4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 EPG5Q9HCE0 2579 aa4.13□□□□□ -1.75
RAB3GAP1-207ENST00000539493 CLPSL1A2RUU4 121 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 H3BUX3 64 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 VCYO14598 125 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LY6EQ16553 131 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 DYNLRB2Q8TF09 96 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 KIF25-AS1Q9Y6Z4 181 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 A0A096LNT2 108 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 A6NDX4 124 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LINC00315P59091 139 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ZNF625Q96I27 306 aaPredicted RBP4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ZANQ9Y493 2812 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 NDUFA1O15239 70 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 CD28P10747 220 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LINC00167Q96N53 147 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C14orf132Q9NPU4 83 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 FAM208BQ5VWN6 2430 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 hDV103S1A0JD37 113 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 SPANXN1Q5VSR9 72 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGFL4Q6B9Z1 124 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 Q8TAT8 98 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 POLQO75417 2590 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3-66A0A0C4DH42 116 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 HIST2H2BCQ6DN03 193 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 HIST2H2BDQ6DRA6 164 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3OR16-13A0A075B7E8 117 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3-74A0A0B4J1X5 117 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 H3BS24 57 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 LINC01356Q8N9X3 169 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ANKRD17O75179 2603 aaKnown RBP4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 NACAE9PAV3 2078 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ADARB2-AS1A8MUL3 147 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 K7EMT4 169 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 UBE2BP63146 152 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ENHOQ6UWT2 76 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 Q6ZRP5 223 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 MAPK1IP1LQ8NDC0 245 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 PHLDA3Q9Y5J5 127 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3-49A0A0A0MS15 119 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 H0YGX0 51 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 H3BUA1 57 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 USP9YO00507 2555 aaPredicted RBP4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 KRTAP10-9P60411 292 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
RAB3GAP1-207ENST00000539493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.09□□□□□ -1.757e-7■■■■□ 21.1
RAB3GAP1-207ENST00000539493 TRAV12-3A0A0B4J271 114 aa4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 RPL39P62891 51 aaKnown RBP4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ZNF580Q9UK33 172 aa4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 SNURFQ9Y675 71 aa4.09□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGLV4-3A0A075B6K6 122 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 PRAC2D3DTV9 90 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 IGLV1-40P01703 118 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 IGHV4-59P01825 116 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 CXCL6P80162 114 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 DEFB112Q30KQ8 113 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 FAM104AQ969W3 186 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 USMG5Q96IX5 58 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 OPRPNQ99935 248 aaPredicted RBP4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 PTPN13Q12923 2485 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 MXRA5Q9NR99 2828 aa4.09□□□□□ -1.76
RAB3GAP1-207ENST00000539493 A0A0J9YXV3 536 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 IGHV3-11P01762 117 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 PIK3CD-AS1Q5SR53 167 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 TENM4Q6N022 2769 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 ABCA12Q86UK0 2595 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 A6NN06 94 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 NDUFA4O00483 81 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 C20orf203Q8NBC4 194 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 APCP25054 2843 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 TRAV10A0A0B4J240 114 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 ZNF73O43830 326 aaPredicted RBP4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 DEFB113Q30KQ7 82 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
RAB3GAP1-207ENST00000539493 NAV2Q8IVL1 2488 aa4.07□□□□□ -1.76
RAB3GAP1-207ENST00000539493 IGHV4-31P0DP07 118 aa4.07□□□□□ -1.76
RAB3GAP1-207ENST00000539493 FSHBP01225 129 aa4.07□□□□□ -1.76
RAB3GAP1-207ENST00000539493 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
RAB3GAP1-207ENST00000539493 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms