RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
CLN6-202ENST00000538696 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
CLN6-202ENST00000538696 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 NMUP48645 174 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 COX6A2Q02221 97 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 UQCR10Q9UDW1 63 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
CLN6-202ENST00000538696 COX8AP10176 69 aa11.62□□□□□ -0.55
CLN6-202ENST00000538696 DDTP30046 118 aa11.62□□□□□ -0.55
CLN6-202ENST00000538696 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
CLN6-202ENST00000538696 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
CLN6-202ENST00000538696 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 E9PLD3 99 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 M0R2N4 97 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 HERVK_113P61574 105 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 Q6ZR54 194 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 PCP2Q8IVA1 136 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
CLN6-202ENST00000538696 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 SLC25A34Q6PIV7 304 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 TTTY13Q9BZ97 58 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
CLN6-202ENST00000538696 HERVK_113P63121 156 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
CLN6-202ENST00000538696 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 SPINK8P0C7L1 97 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 SEC11AP67812 179 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 KLK12Q9UKR0 248 aa11.59□□□□□ -0.55
CLN6-202ENST00000538696 K7EP13 123 aa11.58□□□□□ -0.56
CLN6-202ENST00000538696 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
CLN6-202ENST00000538696 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
CLN6-202ENST00000538696 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
CLN6-202ENST00000538696 TRAV8-3A0A0A6YYJ7 113 aa11.57□□□□□ -0.56
CLN6-202ENST00000538696 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
CLN6-202ENST00000538696 HNRNPA3P51991 378 aaKnown RBP11.57□□□□□ -0.56
CLN6-202ENST00000538696 REG3AQ06141 175 aa11.57□□□□□ -0.56
CLN6-202ENST00000538696 RYR3Q15413 4870 aa11.56□□□□□ -0.56
CLN6-202ENST00000538696 H3BRM9 83 aa11.56□□□□□ -0.56
CLN6-202ENST00000538696 LEPROTO15243 131 aa11.56□□□□□ -0.56
CLN6-202ENST00000538696 CCL25O15444 150 aa11.55□□□□□ -0.56
CLN6-202ENST00000538696 DLEU1O43261 78 aa11.55□□□□□ -0.56
CLN6-202ENST00000538696 SS18Q15532 418 aa11.55□□□□□ -0.56
CLN6-202ENST00000538696 C2orf91Q6ZV80 131 aa11.55□□□□□ -0.56
CLN6-202ENST00000538696 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
CLN6-202ENST00000538696 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
CLN6-202ENST00000538696 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
CLN6-202ENST00000538696 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
CLN6-202ENST00000538696 IGHV3OR16-9A0A0B4J2B5 98 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 J3QQQ9 107 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 XCL1P47992 114 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 UBE2WQ96B02 151 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 Q9HAA7 133 aa11.53□□□□□ -0.56
CLN6-202ENST00000538696 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
CLN6-202ENST00000538696 CRPP02741 224 aa11.52□□□□□ -0.57
CLN6-202ENST00000538696 LGALS3P17931 250 aaKnown RBP11.52□□□□□ -0.57
CLN6-202ENST00000538696 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.57
CLN6-202ENST00000538696 DNAH2Q9P225 4427 aa11.52□□□□□ -0.57
CLN6-202ENST00000538696 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 CTAG1AP78358 180 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 C6orf223Q8N319 242 aa11.51□□□□□ -0.57
CLN6-202ENST00000538696 C1orf134Q5TEV5 83 aa11.49□□□□□ -0.57
CLN6-202ENST00000538696 DNAH10Q8IVF4 4471 aa11.48□□□□□ -0.57
CLN6-202ENST00000538696 A0A087WZ39 114 aa11.48□□□□□ -0.57
CLN6-202ENST00000538696 MIAQ16674 131 aa11.48□□□□□ -0.57
CLN6-202ENST00000538696 CD164L2Q6UWJ8 174 aa11.48□□□□□ -0.57
CLN6-202ENST00000538696 Q6ZRN7 208 aaPredicted RBP11.48□□□□□ -0.57
CLN6-202ENST00000538696 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
CLN6-202ENST00000538696 FOXI1Q12951 378 aa11.47□□□□□ -0.57
CLN6-202ENST00000538696 DNAH17Q9UFH2 4485 aa11.47□□□□□ -0.57
CLN6-202ENST00000538696 HIGD1BQ9P298 99 aa11.46□□□□□ -0.57
CLN6-202ENST00000538696 FRAS1Q86XX4 4008 aa11.46□□□□□ -0.58
CLN6-202ENST00000538696 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
CLN6-202ENST00000538696 RTL8CO15255 209 aa11.45□□□□□ -0.58
CLN6-202ENST00000538696 RMI2Q96E14 147 aa11.45□□□□□ -0.58
CLN6-202ENST00000538696 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
CLN6-202ENST00000538696 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 COX7A2LO14548 114 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 EREGO14944 169 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 KRTAP26-1Q6PEX3 210 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 LINC01561Q8N1V8 128 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
CLN6-202ENST00000538696 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
CLN6-202ENST00000538696 NDUFA1O15239 70 aa11.42□□□□□ -0.58
CLN6-202ENST00000538696 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
CLN6-202ENST00000538696 SNHG12Q9BXW3 62 aa11.42□□□□□ -0.58
CLN6-202ENST00000538696 TOMM7Q9P0U1 55 aa11.42□□□□□ -0.58
CLN6-202ENST00000538696 HINT1P49773 126 aaPredicted RBP11.41□□□□□ -0.58
CLN6-202ENST00000538696 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
CLN6-202ENST00000538696 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms