RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TRGC2P03986 189 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 S100A8P05109 93 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 PMCHP20382 165 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 RIGQ13278 110 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 CD164L2Q6UWJ8 174 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
SMARCA4-206ENST00000538456 APOMO95445 188 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 MALP21145 153 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 CAMK2N2Q96S95 79 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 TRAPPC1Q9Y5R8 145 aa8.52□□□□□ -1.05
SMARCA4-206ENST00000538456 TSHBP01222 138 aa8.51□□□□□ -1.05
SMARCA4-206ENST00000538456 MRPL18Q9H0U6 180 aaKnown RBP8.51□□□□□ -1.05
SMARCA4-206ENST00000538456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
SMARCA4-206ENST00000538456 ESDP10768 282 aa8.5□□□□□ -1.05
SMARCA4-206ENST00000538456 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
SMARCA4-206ENST00000538456 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
SMARCA4-206ENST00000538456 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
SMARCA4-206ENST00000538456 COX7A2LO14548 114 aa8.49□□□□□ -1.05
SMARCA4-206ENST00000538456 IGLV7-43P04211 117 aa8.49□□□□□ -1.05
SMARCA4-206ENST00000538456 PRR4Q16378 134 aa8.49□□□□□ -1.05
SMARCA4-206ENST00000538456 OPRPNQ99935 248 aaPredicted RBP8.49□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
SMARCA4-206ENST00000538456 TRBV6-5A0A0K0K1A5 114 aa8.47□□□□□ -1.05
SMARCA4-206ENST00000538456 H0Y9J4 135 aa8.47□□□□□ -1.05
SMARCA4-206ENST00000538456 RNASE13Q5GAN3 156 aaKnown RBP8.47□□□□□ -1.05
SMARCA4-206ENST00000538456 TMEM191AQ9H0A3 160 aa8.47□□□□□ -1.05
SMARCA4-206ENST00000538456 A0A087WZ39 114 aa8.46□□□□□ -1.06
SMARCA4-206ENST00000538456 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 FAM168BA1KXE4 195 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 SPAG11BQ08648 103 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 C2orf48Q96LS8 159 aa8.45□□□□□ -1.06
SMARCA4-206ENST00000538456 FAT4Q6V0I7 4981 aa8.44□□□□□ -1.06
SMARCA4-206ENST00000538456 S100A6P06703 90 aa8.44□□□□□ -1.06
SMARCA4-206ENST00000538456 FAM104BQ5XKR9 115 aa8.44□□□□□ -1.06
SMARCA4-206ENST00000538456 IGLV1-50A0A075B6I6 118 aa8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 KRTAP1-4P0C5Y4 121 aa8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 UBE2D1P51668 147 aa8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 FAM19A5Q7Z5A7 132 aaPredicted RBP8.43□□□□□ -1.06
SMARCA4-206ENST00000538456 TRBV27A0A0K0K1C4 114 aa8.42□□□□□ -1.06
SMARCA4-206ENST00000538456 FCER1GP30273 86 aa8.42□□□□□ -1.06
SMARCA4-206ENST00000538456 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
SMARCA4-206ENST00000538456 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
SMARCA4-206ENST00000538456 ALKBH7Q9BT30 221 aaPredicted RBP8.42□□□□□ -1.06
SMARCA4-206ENST00000538456 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 RAB4AP20338 218 aa8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 NDUFA6P56556 154 aa8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 Q6ZUT4 128 aa8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
SMARCA4-206ENST00000538456 PPBPP02775 128 aa8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 SNRPEP62304 92 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 ORAOV1Q8WV07 137 aa8.4□□□□□ -1.06
SMARCA4-206ENST00000538456 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
SMARCA4-206ENST00000538456 OR10D4PQ8NGN7 298 aa8.39□□□□□ -1.07
SMARCA4-206ENST00000538456 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
SMARCA4-206ENST00000538456 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
SMARCA4-206ENST00000538456 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 D6R8Y8 96 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 CKS2P33552 79 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 RPL13AP40429 203 aaKnown RBP8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 UBE2BP63146 152 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 SMAGPQ0VAQ4 97 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
SMARCA4-206ENST00000538456 M0QXV9 152 aa8.37□□□□□ -1.07
SMARCA4-206ENST00000538456 VCYO14598 125 aa8.37□□□□□ -1.07
SMARCA4-206ENST00000538456 NDUFA1O15239 70 aa8.37□□□□□ -1.07
SMARCA4-206ENST00000538456 BAGE3Q86Y29 109 aa8.37□□□□□ -1.07
SMARCA4-206ENST00000538456 PRELID3AQ96N28 172 aa8.37□□□□□ -1.07
SMARCA4-206ENST00000538456 TSPAN13O95857 204 aa8.36□□□□□ -1.07
SMARCA4-206ENST00000538456 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
SMARCA4-206ENST00000538456 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
SMARCA4-206ENST00000538456 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms