RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GAGE5Q13069 117 aa5.71□□□□□ -1.5
USP28-205ENST00000537706 GAGE13Q4V321 117 aa5.71□□□□□ -1.5
USP28-205ENST00000537706 Q6ZRP5 223 aa5.71□□□□□ -1.5
USP28-205ENST00000537706 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
USP28-205ENST00000537706 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 CHTF8P0CG12 524 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 RNASE3P12724 160 aaKnown RBP5.7□□□□□ -1.5
USP28-205ENST00000537706 CNBPP62633 177 aaKnown RBP5.7□□□□□ -1.5
USP28-205ENST00000537706 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 NRACQ8N912 160 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 IGHV3-73A0A0B4J1V6 119 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 M0R381 172 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 IGLC3P0DOY3 106 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 LINC01547P58512 204 aaPredicted RBP5.7□□□□□ -1.5
USP28-205ENST00000537706 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
USP28-205ENST00000537706 ATOH7Q8N100 152 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 Q8N8P6 123 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 UQCR10Q9UDW1 63 aa5.7□□□□□ -1.5
USP28-205ENST00000537706 MAJINQ3KP22 176 aa5.69□□□□□ -1.5
USP28-205ENST00000537706 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 GNRH2O43555 120 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 CFAP126Q5VTH2 177 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 C9orf85Q96MD7 179 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 C2orf88Q9BSF0 95 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 ST20Q9HBF5 79 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 FCER1GP30273 86 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 MIAQ16674 131 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
USP28-205ENST00000537706 HSBP1L1C9JCN9 74 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 M0R143 59 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 PPP1R17O96001 155 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 ZNF876PQ49A33 203 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 STPG4Q8N801 248 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 IFI27L1Q96BM0 104 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 C20orf78Q9BR46 151 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 SNHG12Q9BXW3 62 aa5.67□□□□□ -1.5
USP28-205ENST00000537706 K7EMI3 77 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
USP28-205ENST00000537706 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 H0Y8G0 127 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 ANGP03950 147 aaKnown RBP5.66□□□□□ -1.5
USP28-205ENST00000537706 MGPP08493 103 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 SMIM17P0DL12 118 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
USP28-205ENST00000537706 Q6ZN92 141 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 PKIGQ9Y2B9 76 aa5.66□□□□□ -1.5
USP28-205ENST00000537706 LINC00694P0DN24 101 aa5.65□□□□□ -1.51
USP28-205ENST00000537706 RPL32P62910 135 aaKnown RBP5.65□□□□□ -1.51
USP28-205ENST00000537706 ATP5LO75964 103 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 RPL39LQ96EH5 51 aaKnown RBP5.64□□□□□ -1.51
USP28-205ENST00000537706 PMCHL2Q9BQD1 86 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 LINC00474Q9P2X8 69 aa5.64□□□□□ -1.51
USP28-205ENST00000537706 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
USP28-205ENST00000537706 ZFP2Q6ZN57 461 aa5.63□□□□□ -1.51
USP28-205ENST00000537706 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 TCAPO15273 167 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 COX6A2Q02221 97 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 PIK3CD-AS1Q5SR53 167 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 SLC25A34Q6PIV7 304 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 A0A087WWL8 130 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 TRBV6-5A0A0K0K1A5 114 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 A0A1B0GV90 55 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 UBE2D1P51668 147 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 JPT2Q9H910 190 aa5.62□□□□□ -1.51
USP28-205ENST00000537706 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 LINC01549A6NIU2 74 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 A8MWV9 139 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 COX8AP10176 69 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 ZNF56Q15929 161 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 PTH2Q96A98 100 aa5.61□□□□□ -1.51
USP28-205ENST00000537706 F5H697 171 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.6□□□□□ -1.51
USP28-205ENST00000537706 G0S2P27469 103 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 POLR2KP53803 58 aaKnown RBP5.6□□□□□ -1.51
USP28-205ENST00000537706 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 FAM74A4Q5TZK3 123 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 TRAV12-1A0A0B4J245 112 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 TRBV27A0A0K0K1C4 114 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 M0QY20 66 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 DPM2O94777 84 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 IGKCP01834 107 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 FGF6P10767 208 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 RPL13AP40429 203 aaKnown RBP5.6□□□□□ -1.51
USP28-205ENST00000537706 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
USP28-205ENST00000537706 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 VCYO14598 125 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 PLNP26678 52 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 BATFQ16520 125 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 CFAP161Q6P656 301 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 C2orf66Q6UXQ4 117 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms