RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 APOMO95445 188 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 C2orf48Q96LS8 159 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 LINC00474Q9P2X8 69 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 A0A096LNI7 61 aa10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 IFITM10A6NMD0 228 aa10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 KRTAP29-1A8MX34 341 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 ORMDL2Q53FV1 153 aa10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 OR10D4PQ8NGN7 298 aa10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 NXT2Q9NPJ8 142 aaKnown RBP10.87□□□□□ -0.67
SFSWAP-205ENST00000537164 NPSP0C0P6 89 aa10.86□□□□□ -0.67
SFSWAP-205ENST00000537164 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
SFSWAP-205ENST00000537164 TMEM141Q96I45 108 aa10.86□□□□□ -0.67
SFSWAP-205ENST00000537164 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
SFSWAP-205ENST00000537164 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
SFSWAP-205ENST00000537164 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
SFSWAP-205ENST00000537164 S100PP25815 95 aa10.85□□□□□ -0.67
SFSWAP-205ENST00000537164 MAJINQ3KP22 176 aa10.85□□□□□ -0.67
SFSWAP-205ENST00000537164 Q6ZRU5 148 aa10.85□□□□□ -0.67
SFSWAP-205ENST00000537164 F8WDY8 70 aa10.84□□□□□ -0.67
SFSWAP-205ENST00000537164 RHEBQ15382 184 aa10.84□□□□□ -0.67
SFSWAP-205ENST00000537164 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 COX19Q49B96 90 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 LINC00242Q5T6M2 205 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 STPG4Q8N801 248 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 CAMK2N2Q96S95 79 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 AMELXQ99217 191 aa10.83□□□□□ -0.68
SFSWAP-205ENST00000537164 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 A0A087WZ39 114 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 G0S2P27469 103 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 RNF151Q2KHN1 245 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 KIAA1644Q3SXP7 199 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 TEX43Q6ZNM6 134 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 LINC00173Q6ZV60 143 aa10.82□□□□□ -0.68
SFSWAP-205ENST00000537164 TGIF2-C20orf24A0A0A6YYL0 155 aa10.81□□□□□ -0.68
SFSWAP-205ENST00000537164 UBE2D1P51668 147 aa10.81□□□□□ -0.68
SFSWAP-205ENST00000537164 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
SFSWAP-205ENST00000537164 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
SFSWAP-205ENST00000537164 LINC01546A6NGU7 62 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 OXTP01178 125 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 MT-ND6P03923 174 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 Q6ZN92 141 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 C7orf33Q8WU49 177 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 ORAOV1Q8WV07 137 aa10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-205ENST00000537164 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 TOMM6Q96B49 74 aa10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 VCX2Q9H322 139 aa10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
SFSWAP-205ENST00000537164 J3QL48 77 aa10.78□□□□□ -0.68
SFSWAP-205ENST00000537164 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
SFSWAP-205ENST00000537164 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.69
SFSWAP-205ENST00000537164 LINC01549A6NIU2 74 aa10.76□□□□□ -0.69
SFSWAP-205ENST00000537164 NDUFA1O15239 70 aa10.76□□□□□ -0.69
SFSWAP-205ENST00000537164 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
SFSWAP-205ENST00000537164 ERASQ7Z444 233 aa10.76□□□□□ -0.69
SFSWAP-205ENST00000537164 TLX1NBP0CAT3 122 aa10.75□□□□□ -0.69
SFSWAP-205ENST00000537164 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
SFSWAP-205ENST00000537164 MRPL18Q9H0U6 180 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-205ENST00000537164 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
SFSWAP-205ENST00000537164 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 SEC11AP67812 179 aa10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 PRR3P79522 188 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 UNQ6190/PRO20217Q6UXQ8 127 aa10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
SFSWAP-205ENST00000537164 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
SFSWAP-205ENST00000537164 SNAPINO95295 136 aa10.72□□□□□ -0.69
SFSWAP-205ENST00000537164 APOC3P02656 99 aa10.72□□□□□ -0.69
SFSWAP-205ENST00000537164 HERVK_113P63121 156 aa10.72□□□□□ -0.69
SFSWAP-205ENST00000537164 SVBPQ8N300 66 aa10.72□□□□□ -0.69
SFSWAP-205ENST00000537164 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
SFSWAP-205ENST00000537164 RPL18AQ02543 176 aaKnown RBP10.71□□□□□ -0.69
SFSWAP-205ENST00000537164 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
SFSWAP-205ENST00000537164 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
SFSWAP-205ENST00000537164 C9orf116Q5BN46 136 aaPredicted RBP10.7□□□□□ -0.7
SFSWAP-205ENST00000537164 Q6ZRP5 223 aa10.7□□□□□ -0.7
SFSWAP-205ENST00000537164 CDKN2A-AS1Q9UH64 79 aa10.69□□□□□ -0.7
SFSWAP-205ENST00000537164 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
SFSWAP-205ENST00000537164 FA2HQ7L5A8 372 aa10.68□□□□□ -0.7
SFSWAP-205ENST00000537164 Q8IZM0 81 aa10.68□□□□□ -0.7
SFSWAP-205ENST00000537164 TRAPPC1Q9Y5R8 145 aa10.68□□□□□ -0.7
SFSWAP-205ENST00000537164 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
SFSWAP-205ENST00000537164 SMCO4Q9NRQ5 59 aa10.67□□□□□ -0.7
SFSWAP-205ENST00000537164 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
SFSWAP-205ENST00000537164 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
SFSWAP-205ENST00000537164 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
SFSWAP-205ENST00000537164 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
SFSWAP-205ENST00000537164 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
SFSWAP-205ENST00000537164 GEMIN7Q9H840 131 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms