RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ADCYAP1P18509 176 aa12.18□□□□□ -0.46
TNFRSF1B-204ENST00000536782 D6R8Y8 96 aa12.17□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TCAPO15273 167 aa12.17□□□□□ -0.46
TNFRSF1B-204ENST00000536782 APOMO95445 188 aa12.17□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
TNFRSF1B-204ENST00000536782 C2orf48Q96LS8 159 aa12.17□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
TNFRSF1B-204ENST00000536782 C5orf38Q86SI9 138 aa12.16□□□□□ -0.46
TNFRSF1B-204ENST00000536782 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
TNFRSF1B-204ENST00000536782 A0A1W2PNN7 141 aa12.15□□□□□ -0.46
TNFRSF1B-204ENST00000536782 Q6ZUT4 128 aa12.15□□□□□ -0.46
TNFRSF1B-204ENST00000536782 ORMDL3Q8N138 153 aa12.15□□□□□ -0.46
TNFRSF1B-204ENST00000536782 SEC11CQ9BY50 192 aa12.15□□□□□ -0.46
TNFRSF1B-204ENST00000536782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1B-204ENST00000536782 COMMD7Q86VX2 200 aa12.14□□□□□ -0.47
TNFRSF1B-204ENST00000536782 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
TNFRSF1B-204ENST00000536782 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1B-204ENST00000536782 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
TNFRSF1B-204ENST00000536782 NPYP01303 97 aa12.12□□□□□ -0.47
TNFRSF1B-204ENST00000536782 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
TNFRSF1B-204ENST00000536782 C9orf116Q5BN46 136 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1B-204ENST00000536782 TMEM136Q6ZRR5 245 aa12.12□□□□□ -0.47
TNFRSF1B-204ENST00000536782 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
TNFRSF1B-204ENST00000536782 RNF151Q2KHN1 245 aa12.11□□□□□ -0.47
TNFRSF1B-204ENST00000536782 OR10D4PQ8NGN7 298 aa12.11□□□□□ -0.47
TNFRSF1B-204ENST00000536782 MT-ND6P03923 174 aa12.1□□□□□ -0.47
TNFRSF1B-204ENST00000536782 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
TNFRSF1B-204ENST00000536782 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-204ENST00000536782 PSORS1C2Q9UIG4 136 aa12.1□□□□□ -0.47
TNFRSF1B-204ENST00000536782 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
TNFRSF1B-204ENST00000536782 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1B-204ENST00000536782 PRSS47A8MTI9 375 aa12.08□□□□□ -0.48
TNFRSF1B-204ENST00000536782 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
TNFRSF1B-204ENST00000536782 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
TNFRSF1B-204ENST00000536782 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
TNFRSF1B-204ENST00000536782 F8WDY8 70 aa12.07□□□□□ -0.48
TNFRSF1B-204ENST00000536782 PHF5AQ7RTV0 110 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1B-204ENST00000536782 MRPL35Q9NZE8 188 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1B-204ENST00000536782 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
TNFRSF1B-204ENST00000536782 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
TNFRSF1B-204ENST00000536782 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
TNFRSF1B-204ENST00000536782 CARHSP1Q9Y2V2 147 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1B-204ENST00000536782 NDUFA1O15239 70 aa12.05□□□□□ -0.48
TNFRSF1B-204ENST00000536782 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1B-204ENST00000536782 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
TNFRSF1B-204ENST00000536782 RAB5AP20339 215 aa12.04□□□□□ -0.48
TNFRSF1B-204ENST00000536782 S100PP25815 95 aa12.04□□□□□ -0.48
TNFRSF1B-204ENST00000536782 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
TNFRSF1B-204ENST00000536782 RHEBQ15382 184 aa12.03□□□□□ -0.48
TNFRSF1B-204ENST00000536782 C10orf25Q5T742 122 aa12.01□□□□□ -0.49
TNFRSF1B-204ENST00000536782 Q8N8P6 123 aa12.01□□□□□ -0.49
TNFRSF1B-204ENST00000536782 LPAP08519 4548 aa12□□□□□ -0.49
TNFRSF1B-204ENST00000536782 K7EMI3 77 aa12□□□□□ -0.49
TNFRSF1B-204ENST00000536782 IGLV7-43P04211 117 aa12□□□□□ -0.49
TNFRSF1B-204ENST00000536782 TLX1NBP0CAT3 122 aa12□□□□□ -0.49
TNFRSF1B-204ENST00000536782 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
TNFRSF1B-204ENST00000536782 A0A087WZ39 114 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 LOC389332A0A1B0GUA5 103 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 IFI27P40305 119 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 COX19Q49B96 90 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 DIRC1Q969H9 104 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
TNFRSF1B-204ENST00000536782 GNB1LQ9BYB4 327 aa11.98□□□□□ -0.49
TNFRSF1B-204ENST00000536782 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1B-204ENST00000536782 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
TNFRSF1B-204ENST00000536782 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
TNFRSF1B-204ENST00000536782 FAM19A5Q7Z5A7 132 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1B-204ENST00000536782 RPS10P5Q9NQ39 176 aa11.97□□□□□ -0.49
TNFRSF1B-204ENST00000536782 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
TNFRSF1B-204ENST00000536782 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 LINC00242Q5T6M2 205 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 KRTAP11-1Q8IUC1 163 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 CYSLTR1Q9Y271 337 aa11.95□□□□□ -0.5
TNFRSF1B-204ENST00000536782 KIAA1644Q3SXP7 199 aa11.94□□□□□ -0.5
TNFRSF1B-204ENST00000536782 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 TRBV30A0A0K0K1B3 111 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 H0Y9J4 135 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 NPSP0C0P6 89 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 G0S2P27469 103 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 SVBPQ8N300 66 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
TNFRSF1B-204ENST00000536782 SNAPINO95295 136 aa11.92□□□□□ -0.5
TNFRSF1B-204ENST00000536782 APOC3P02656 99 aa11.92□□□□□ -0.5
TNFRSF1B-204ENST00000536782 M0QXV9 152 aa11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 UBE2BP63146 152 aa11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1B-204ENST00000536782 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
TNFRSF1B-204ENST00000536782 UBE2D1P51668 147 aa11.89□□□□□ -0.51
TNFRSF1B-204ENST00000536782 Q6ZN92 141 aa11.89□□□□□ -0.51
TNFRSF1B-204ENST00000536782 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms