RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 G0S2P27469 103 aa7.29□□□□□ -1.24
TNFRSF1A-208ENST00000536194 PMCHL1Q16048 86 aa7.29□□□□□ -1.24
TNFRSF1A-208ENST00000536194 ERASQ7Z444 233 aa7.29□□□□□ -1.24
TNFRSF1A-208ENST00000536194 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
TNFRSF1A-208ENST00000536194 Q6ZN92 141 aa7.28□□□□□ -1.24
TNFRSF1A-208ENST00000536194 SDIM1Q6ZPB5 146 aa7.28□□□□□ -1.24
TNFRSF1A-208ENST00000536194 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
TNFRSF1A-208ENST00000536194 VCX2Q9H322 139 aa7.28□□□□□ -1.24
TNFRSF1A-208ENST00000536194 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
TNFRSF1A-208ENST00000536194 PANO1I0J062 215 aa7.27□□□□□ -1.25
TNFRSF1A-208ENST00000536194 MALP21145 153 aa7.27□□□□□ -1.25
TNFRSF1A-208ENST00000536194 FAM19A3Q7Z5A8 133 aa7.27□□□□□ -1.25
TNFRSF1A-208ENST00000536194 C2orf88Q9BSF0 95 aa7.27□□□□□ -1.25
TNFRSF1A-208ENST00000536194 IGLV4-69A0A075B6H9 119 aa7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 A0A087WZ39 114 aa7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 PDZD11Q5EBL8 140 aa7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 SCXQ7RTU7 201 aa7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
TNFRSF1A-208ENST00000536194 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 LINC01549A6NIU2 74 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 HBDP02042 147 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 Q8N1X5 172 aa7.25□□□□□ -1.25
TNFRSF1A-208ENST00000536194 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 APOMO95445 188 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 LINC00310P59036 64 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 RAB5BP61020 215 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 ORAOV1Q8WV07 137 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CARD19Q96LW7 228 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CHAC1Q9BUX1 264 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CST9LQ9H4G1 147 aa7.24□□□□□ -1.25
TNFRSF1A-208ENST00000536194 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CIRBPQ14011 172 aaKnown RBP7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 KIAA0087Q14695 138 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 Q6ZRU5 148 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 OR10D4PQ8NGN7 298 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
TNFRSF1A-208ENST00000536194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
TNFRSF1A-208ENST00000536194 HERVK_113P63121 156 aa7.22□□□□□ -1.25
TNFRSF1A-208ENST00000536194 PMVKQ15126 192 aa7.22□□□□□ -1.25
TNFRSF1A-208ENST00000536194 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
TNFRSF1A-208ENST00000536194 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 NUPR1O60356 82 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 SERF1AO75920 110 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 SEC11AP67812 179 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 BAGE3Q86Y29 109 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 LINC01561Q8N1V8 128 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
TNFRSF1A-208ENST00000536194 A0A096LNI7 61 aa7.2□□□□□ -1.26
TNFRSF1A-208ENST00000536194 ATP5LO75964 103 aa7.2□□□□□ -1.26
TNFRSF1A-208ENST00000536194 SPACA4Q8TDM5 124 aa7.2□□□□□ -1.26
TNFRSF1A-208ENST00000536194 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
TNFRSF1A-208ENST00000536194 SMIM1B2RUZ4 78 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 ATP6V1G1O75348 118 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HSBP1O75506 76 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 Q5VSD8 79 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
TNFRSF1A-208ENST00000536194 FAT1Q14517 4588 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 IGLC3P0DOY3 106 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 NDUFA6P56556 154 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 MRPL35Q9NZE8 188 aaKnown RBP7.18□□□□□ -1.26
TNFRSF1A-208ENST00000536194 A0A087WYN8 130 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 F8WDY8 70 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 NDUFA1O15239 70 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 IFI27L1Q96BM0 104 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms