RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
CLSTN3-205ENST00000535452 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
CLSTN3-205ENST00000535452 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
CLSTN3-205ENST00000535452 SMIM2Q9BVW6 85 aa8.25□□□□□ -1.09
CLSTN3-205ENST00000535452 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 SMIM27A0A1W2PRY6 76 aa8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 D6R8Y8 96 aa8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 Q6ZN92 141 aa8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
CLSTN3-205ENST00000535452 DIRC1Q969H9 104 aa8.23□□□□□ -1.09
CLSTN3-205ENST00000535452 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-205ENST00000535452 A0A087WZ39 114 aa8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 PRSS2P07478 247 aa8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 UBE2BP63146 152 aa8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
CLSTN3-205ENST00000535452 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
CLSTN3-205ENST00000535452 TEX43Q6ZNM6 134 aa8.21□□□□□ -1.1
CLSTN3-205ENST00000535452 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.1
CLSTN3-205ENST00000535452 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
CLSTN3-205ENST00000535452 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
CLSTN3-205ENST00000535452 G0S2P27469 103 aa8.2□□□□□ -1.1
CLSTN3-205ENST00000535452 GAGE2EQ4V326 116 aa8.2□□□□□ -1.1
CLSTN3-205ENST00000535452 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
CLSTN3-205ENST00000535452 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
CLSTN3-205ENST00000535452 GAGE2DQ9UEU5 116 aa8.2□□□□□ -1.1
CLSTN3-205ENST00000535452 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 UBE2D1P51668 147 aa8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 PRELID3AQ96N28 172 aa8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 LAMTOR2Q9Y2Q5 125 aa8.19□□□□□ -1.1
CLSTN3-205ENST00000535452 IGHV3OR16-9A0A0B4J2B5 98 aa8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 NPYP01303 97 aa8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 CKS1BP61024 79 aa8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 FAM19A5Q7Z5A7 132 aaPredicted RBP8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
CLSTN3-205ENST00000535452 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
CLSTN3-205ENST00000535452 RAB14P61106 215 aa8.17□□□□□ -1.1
CLSTN3-205ENST00000535452 VCX2Q9H322 139 aa8.17□□□□□ -1.1
CLSTN3-205ENST00000535452 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
CLSTN3-205ENST00000535452 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
CLSTN3-205ENST00000535452 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 MT-ND4LP03901 98 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 SEC11AP67812 179 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
CLSTN3-205ENST00000535452 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
CLSTN3-205ENST00000535452 M0QXV9 152 aa8.15□□□□□ -1.1
CLSTN3-205ENST00000535452 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
CLSTN3-205ENST00000535452 A0A1B0GXF2 115 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 K7EMI3 77 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 UNQ6190/PRO20217Q6UXQ8 127 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
CLSTN3-205ENST00000535452 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-205ENST00000535452 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
CLSTN3-205ENST00000535452 GEMIN7Q9H840 131 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-205ENST00000535452 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
CLSTN3-205ENST00000535452 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 C9JQL5 133 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 H0Y9J4 135 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 LINC00242Q5T6M2 205 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
CLSTN3-205ENST00000535452 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 NPSP0C0P6 89 aa8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 HERVK_113P63121 156 aa8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 Q8N8P6 123 aa8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-205ENST00000535452 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
CLSTN3-205ENST00000535452 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
CLSTN3-205ENST00000535452 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
CLSTN3-205ENST00000535452 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
CLSTN3-205ENST00000535452 LINC01549A6NIU2 74 aa8.08□□□□□ -1.12
CLSTN3-205ENST00000535452 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
CLSTN3-205ENST00000535452 NUPR1O60356 82 aa8.08□□□□□ -1.12
CLSTN3-205ENST00000535452 CXCL5P42830 114 aa8.08□□□□□ -1.12
CLSTN3-205ENST00000535452 Q8IZM0 81 aa8.08□□□□□ -1.12
CLSTN3-205ENST00000535452 F8VRH5 84 aa8.05□□□□□ -1.12
CLSTN3-205ENST00000535452 S100PP25815 95 aa8.05□□□□□ -1.12
CLSTN3-205ENST00000535452 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
CLSTN3-205ENST00000535452 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 AMELXQ99217 191 aa8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-205ENST00000535452 ZNF861PO60384 105 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms