RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 S100A8P05109 93 aa12.96□□□□□ -0.33
SSH3-211ENST00000534112 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
SSH3-211ENST00000534112 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
SSH3-211ENST00000534112 C5orf38Q86SI9 138 aa12.96□□□□□ -0.33
SSH3-211ENST00000534112 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
SSH3-211ENST00000534112 VCYO14598 125 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 FCER1GP30273 86 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 FAM104BQ5XKR9 115 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 DIRC1Q969H9 104 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 MUC2Q02817 5179 aa12.95□□□□□ -0.34
SSH3-211ENST00000534112 IGLV7-43P04211 117 aa12.94□□□□□ -0.34
SSH3-211ENST00000534112 RNF151Q2KHN1 245 aa12.94□□□□□ -0.34
SSH3-211ENST00000534112 SPAG11BQ08648 103 aa12.93□□□□□ -0.34
SSH3-211ENST00000534112 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
SSH3-211ENST00000534112 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
SSH3-211ENST00000534112 IMMP2LQ96T52 175 aa12.93□□□□□ -0.34
SSH3-211ENST00000534112 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
SSH3-211ENST00000534112 RHEBQ15382 184 aa12.91□□□□□ -0.34
SSH3-211ENST00000534112 A0A087WZ39 114 aa12.9□□□□□ -0.34
SSH3-211ENST00000534112 Q6ZUT4 128 aa12.9□□□□□ -0.34
SSH3-211ENST00000534112 H0Y9J4 135 aa12.89□□□□□ -0.35
SSH3-211ENST00000534112 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
SSH3-211ENST00000534112 KRTAP11-1Q8IUC1 163 aa12.89□□□□□ -0.35
SSH3-211ENST00000534112 NRACQ8N912 160 aa12.89□□□□□ -0.35
SSH3-211ENST00000534112 OR10D4PQ8NGN7 298 aa12.89□□□□□ -0.35
SSH3-211ENST00000534112 KIR2DL4Q99706 377 aa12.89□□□□□ -0.35
SSH3-211ENST00000534112 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
SSH3-211ENST00000534112 PPP1R17O96001 155 aa12.88□□□□□ -0.35
SSH3-211ENST00000534112 TIMM21Q9BVV7 248 aa12.88□□□□□ -0.35
SSH3-211ENST00000534112 TRAV9-1A0A075B6T8 112 aa12.87□□□□□ -0.35
SSH3-211ENST00000534112 FAM168BA1KXE4 195 aa12.87□□□□□ -0.35
SSH3-211ENST00000534112 APOC3P02656 99 aa12.87□□□□□ -0.35
SSH3-211ENST00000534112 NDUFA5Q16718 116 aa12.87□□□□□ -0.35
SSH3-211ENST00000534112 RPS10P5Q9NQ39 176 aa12.87□□□□□ -0.35
SSH3-211ENST00000534112 CKS2P33552 79 aa12.86□□□□□ -0.35
SSH3-211ENST00000534112 ORAOV1Q8WV07 137 aa12.86□□□□□ -0.35
SSH3-211ENST00000534112 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 D6R8Y8 96 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 F8WDY8 70 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 S100PP25815 95 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 SVBPQ8N300 66 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
SSH3-211ENST00000534112 TRBV24-1A0A075B6N3 115 aa12.84□□□□□ -0.35
SSH3-211ENST00000534112 PPBPP02775 128 aa12.84□□□□□ -0.35
SSH3-211ENST00000534112 KRTAP1-4P0C5Y4 121 aa12.84□□□□□ -0.35
SSH3-211ENST00000534112 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
SSH3-211ENST00000534112 IGHV3OR16-9A0A0B4J2B5 98 aa12.83□□□□□ -0.36
SSH3-211ENST00000534112 NDUFA1O15239 70 aa12.83□□□□□ -0.36
SSH3-211ENST00000534112 SNAPINO95295 136 aa12.83□□□□□ -0.36
SSH3-211ENST00000534112 TLX1NBP0CAT3 122 aa12.83□□□□□ -0.36
SSH3-211ENST00000534112 FAM19A5Q7Z5A7 132 aaPredicted RBP12.83□□□□□ -0.36
SSH3-211ENST00000534112 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
SSH3-211ENST00000534112 TNFRSF6BO95407 300 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 NPYP01303 97 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 UNQ6190/PRO20217Q6UXQ8 127 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 TMEM136Q6ZRR5 245 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 ORMDL3Q8N138 153 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
SSH3-211ENST00000534112 RPL39P62891 51 aaKnown RBP12.81□□□□□ -0.36
SSH3-211ENST00000534112 RPL32P62910 135 aaKnown RBP12.81□□□□□ -0.36
SSH3-211ENST00000534112 PRR4Q16378 134 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 GAGE2EQ4V326 116 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 KRTAP7-1Q8IUC3 87 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 C6orf48Q9UBA6 75 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 GAGE2DQ9UEU5 116 aa12.8□□□□□ -0.36
SSH3-211ENST00000534112 UBE2D1P51668 147 aa12.78□□□□□ -0.36
SSH3-211ENST00000534112 SMIM2Q9BVW6 85 aa12.78□□□□□ -0.36
SSH3-211ENST00000534112 SPANXA1Q9NS26 97 aa12.77□□□□□ -0.37
SSH3-211ENST00000534112 LAMTOR2Q9Y2Q5 125 aa12.77□□□□□ -0.37
SSH3-211ENST00000534112 M0QXV9 152 aa12.76□□□□□ -0.37
SSH3-211ENST00000534112 TCAPO15273 167 aa12.76□□□□□ -0.37
SSH3-211ENST00000534112 UBE2BP63146 152 aa12.76□□□□□ -0.37
SSH3-211ENST00000534112 GNB1LQ9BYB4 327 aa12.76□□□□□ -0.37
SSH3-211ENST00000534112 RPL13AP40429 203 aaKnown RBP12.75□□□□□ -0.37
SSH3-211ENST00000534112 MRPS36P82909 103 aaKnown RBP12.75□□□□□ -0.37
SSH3-211ENST00000534112 COX19Q49B96 90 aa12.75□□□□□ -0.37
SSH3-211ENST00000534112 IFITM10A6NMD0 228 aa12.74□□□□□ -0.37
SSH3-211ENST00000534112 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
SSH3-211ENST00000534112 KIAA0087Q14695 138 aa12.74□□□□□ -0.37
SSH3-211ENST00000534112 TGIF2-C20orf24A0A0A6YYL0 155 aa12.73□□□□□ -0.37
SSH3-211ENST00000534112 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
SSH3-211ENST00000534112 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
SSH3-211ENST00000534112 TRBV30A0A0K0K1B3 111 aa12.7□□□□□ -0.38
SSH3-211ENST00000534112 A0A0U1RQV1 116 aa12.7□□□□□ -0.38
SSH3-211ENST00000534112 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
SSH3-211ENST00000534112 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
SSH3-211ENST00000534112 YPEL4Q96NS1 127 aa12.7□□□□□ -0.38
SSH3-211ENST00000534112 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
SSH3-211ENST00000534112 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
SSH3-211ENST00000534112 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
SSH3-211ENST00000534112 LINC00242Q5T6M2 205 aa12.68□□□□□ -0.38
SSH3-211ENST00000534112 Q8N8P6 123 aa12.68□□□□□ -0.38
SSH3-211ENST00000534112 KRTAP9-2Q9BYQ4 174 aa12.68□□□□□ -0.38
SSH3-211ENST00000534112 ZNF861PO60384 105 aa12.67□□□□□ -0.38
SSH3-211ENST00000534112 RAB5AP20339 215 aa12.66□□□□□ -0.38
SSH3-211ENST00000534112 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
SSH3-211ENST00000534112 CBLN2Q8IUK8 224 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms