RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SMDT1Q9H4I9 107 aa7.74□□□□□ -1.17
COPB1-209ENST00000533096 IGHV3OR16-9A0A0B4J2B5 98 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 F8WDY8 70 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 PPP1R17O96001 155 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 RIGQ13278 110 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 NRACQ8N912 160 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 TIMM21Q9BVV7 248 aa7.73□□□□□ -1.17
COPB1-209ENST00000533096 CARHSP1Q9Y2V2 147 aaKnown RBP7.73□□□□□ -1.17
COPB1-209ENST00000533096 IFITM10A6NMD0 228 aa7.72□□□□□ -1.17
COPB1-209ENST00000533096 ZNF861PO60384 105 aa7.72□□□□□ -1.17
COPB1-209ENST00000533096 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
COPB1-209ENST00000533096 MRPL51Q4U2R6 128 aaKnown RBP7.71□□□□□ -1.18
COPB1-209ENST00000533096 CT83Q5H943 113 aa7.71□□□□□ -1.18
COPB1-209ENST00000533096 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
COPB1-209ENST00000533096 PACRGQ96M98 296 aaPredicted RBP7.71□□□□□ -1.18
COPB1-209ENST00000533096 HBBP68871 147 aa7.7□□□□□ -1.18
COPB1-209ENST00000533096 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
COPB1-209ENST00000533096 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
COPB1-209ENST00000533096 FAM104AQ969W3 186 aa7.7□□□□□ -1.18
COPB1-209ENST00000533096 CTDSP1Q9GZU7 261 aa7.7□□□□□ -1.18
COPB1-209ENST00000533096 TGIF2-C20orf24A0A0A6YYL0 155 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 PPP1R2P9O14990 202 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 TCAPO15273 167 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 CKS2P33552 79 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 KIAA0087Q14695 138 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
COPB1-209ENST00000533096 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 LINC01551Q86U37 167 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 SLC51BQ86UW2 128 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 EIF5A2Q9GZV4 153 aaKnown RBP7.68□□□□□ -1.18
COPB1-209ENST00000533096 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
COPB1-209ENST00000533096 A0A087X002 238 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 ZNF727A8MUV8 499 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 SPANXA1Q9NS26 97 aa7.67□□□□□ -1.18
COPB1-209ENST00000533096 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
COPB1-209ENST00000533096 CRYGAP11844 174 aa7.66□□□□□ -1.18
COPB1-209ENST00000533096 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
COPB1-209ENST00000533096 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
COPB1-209ENST00000533096 LINC00862A6NCI5 91 aa7.65□□□□□ -1.18
COPB1-209ENST00000533096 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
COPB1-209ENST00000533096 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
COPB1-209ENST00000533096 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
COPB1-209ENST00000533096 V9GYV3 84 aa7.65□□□□□ -1.18
COPB1-209ENST00000533096 PRSS2P07478 247 aa7.64□□□□□ -1.19
COPB1-209ENST00000533096 RAB5AP20339 215 aa7.64□□□□□ -1.19
COPB1-209ENST00000533096 CKS1BP61024 79 aa7.64□□□□□ -1.19
COPB1-209ENST00000533096 BLOC1S1P78537 153 aa7.64□□□□□ -1.19
COPB1-209ENST00000533096 TRBV24-1A0A075B6N3 115 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 D6R8Y8 96 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 NUPR1O60356 82 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 IFI27P40305 119 aaPredicted RBP7.63□□□□□ -1.19
COPB1-209ENST00000533096 RPL28P46779 137 aaKnown RBP7.63□□□□□ -1.19
COPB1-209ENST00000533096 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 ZC2HC1BQ5TFG8 222 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 ALKAL2Q6UX46 152 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 SMIM2Q9BVW6 85 aa7.63□□□□□ -1.19
COPB1-209ENST00000533096 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
COPB1-209ENST00000533096 NPYP01303 97 aa7.62□□□□□ -1.19
COPB1-209ENST00000533096 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
COPB1-209ENST00000533096 RPL32P62910 135 aaKnown RBP7.61□□□□□ -1.19
COPB1-209ENST00000533096 FAM74A3Q4VXF1 159 aa7.61□□□□□ -1.19
COPB1-209ENST00000533096 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
COPB1-209ENST00000533096 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
COPB1-209ENST00000533096 GAGE10A6NGK3 116 aa7.6□□□□□ -1.19
COPB1-209ENST00000533096 BCE1O60756 84 aa7.6□□□□□ -1.19
COPB1-209ENST00000533096 SRP19P09132 144 aaKnown RBP7.6□□□□□ -1.19
COPB1-209ENST00000533096 MRPL54Q6P161 138 aaKnown RBP7.6□□□□□ -1.19
COPB1-209ENST00000533096 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
COPB1-209ENST00000533096 ALKBH7Q9BT30 221 aaPredicted RBP7.6□□□□□ -1.19
COPB1-209ENST00000533096 ADIRFQ15847 76 aa7.59□□□□□ -1.19
COPB1-209ENST00000533096 Q6ZN92 141 aa7.59□□□□□ -1.19
COPB1-209ENST00000533096 TEX43Q6ZNM6 134 aa7.59□□□□□ -1.19
COPB1-209ENST00000533096 TMEM141Q96I45 108 aa7.59□□□□□ -1.19
COPB1-209ENST00000533096 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 F8W036 122 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 LINC00173Q6ZV60 143 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 LINC00304Q8N9R0 145 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 VCX2Q9H322 139 aa7.58□□□□□ -1.2
COPB1-209ENST00000533096 UBE2AP49459 152 aa7.57□□□□□ -1.2
COPB1-209ENST00000533096 RPL23P62829 140 aaKnown RBP7.57□□□□□ -1.2
COPB1-209ENST00000533096 TMEM136Q6ZRR5 245 aa7.57□□□□□ -1.2
COPB1-209ENST00000533096 TCTE3Q8IZS6 198 aa7.57□□□□□ -1.2
COPB1-209ENST00000533096 C2orf88Q9BSF0 95 aa7.57□□□□□ -1.2
COPB1-209ENST00000533096 PYGO1Q9Y3Y4 419 aa7.57□□□□□ -1.2
COPB1-209ENST00000533096 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
COPB1-209ENST00000533096 A0A1B0GW15 77 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms