RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 HERV-K104P63124 156 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 ATP6V0E2Q8NHE4 81 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 LITAFQ99732 161 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 NDUFA12Q9UI09 145 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 TRGV4A0A0C4DH28 118 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 J3QR89 54 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 UBE2L6O14933 153 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 TSPAN13O95857 204 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 CFC1BP0CG36 223 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 CFC1P0CG37 223 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 RPL35AP18077 110 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 APOC4P55056 127 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 MIAQ16674 131 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 LINC00242Q5T6M2 205 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 LINC01561Q8N1V8 128 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 WFDC9Q8NEX5 89 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 LINC01600Q96MT4 127 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 Q9UF83 564 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 PRO1854Q9UHT4 67 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 C2CD3Q4AC94 2353 aa4.03□□□□□ -1.76
ATPAF1-210ENST00000532925 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 TRBV6-8A0A0A6YYG3 113 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 IGHV3-38A0A0C4DH36 116 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 A0A1B0GUV1 79 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 TEX48A0A1B0GUV7 120 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 A4D1N5 150 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE12JA6NER3 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 INAFM1C9JVW0 142 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE7O76087 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE12FP0CL80 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE12GP0CL81 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE12IP0CL82 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE4Q13068 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE5Q13069 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 CIRBPQ14011 172 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 GAGE13Q4V321 117 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 CEMP1Q6PRD7 247 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 WFDC10AQ9H1F0 79 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
ATPAF1-210ENST00000532925 NF1P21359 2839 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 TRAV8-3A0A0A6YYJ7 113 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 F5H768 121 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 G3V4G9 280 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 H3BMG7 143 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 APOMO95445 188 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 MIFP14174 115 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 NOTCH3Q9UM47 2321 aa4.01□□□□□ -1.77
ATPAF1-210ENST00000532925 JMJD1CQ15652 2540 aa4□□□□□ -1.77
ATPAF1-210ENST00000532925 NSD1Q96L73 2696 aaPredicted RBP4□□□□□ -1.77
ATPAF1-210ENST00000532925 NOTCH2Q04721 2471 aa4□□□□□ -1.77
ATPAF1-210ENST00000532925 SPINK8P0C7L1 97 aa4□□□□□ -1.77
ATPAF1-210ENST00000532925 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
ATPAF1-210ENST00000532925 MUSTN1Q8IVN3 82 aa4□□□□□ -1.77
ATPAF1-210ENST00000532925 ERG28Q9UKR5 140 aa4□□□□□ -1.77
ATPAF1-210ENST00000532925 FN1P02751 2386 aaKnown RBP4□□□□□ -1.77
ATPAF1-210ENST00000532925 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 IGHV3-64A0A075B6Q5 118 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 A0A087WZ39 114 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 A8MZ25 164 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 COX6CP09669 75 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 FAM222AQ5U5X8 452 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 SPATA3Q8NHX4 192 aa3.99□□□□□ -1.77
ATPAF1-210ENST00000532925 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 LOC107984156A0A0G2JMH3 177 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 GYPEP15421 78 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 COX6A2Q02221 97 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 ARL17AQ8IVW1 177 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 MUC7Q8TAX7 377 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 VPS25Q9BRG1 176 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 Q9H8V8 135 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 HECTD1Q9ULT8 2610 aa3.98□□□□□ -1.77
ATPAF1-210ENST00000532925 OTOGQ6ZRI0 2925 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 IBA57-AS1B1ANH7 110 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 H3BNG1 76 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 TCL1BO95988 128 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 ATP5G1P05496 136 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 CXCL5P42830 114 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 WFDC2Q14508 124 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 ADAMTSL4-AS1Q5T5F5 129 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 TEN1Q86WV5 123 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
ATPAF1-210ENST00000532925 Q8NAQ8 132 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms